Ziziphus jujuba (Chinese jujube): 107425756
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Entry
107425756 CDS
T04794
Name
(RefSeq) ABC transporter I family member 19
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107425756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zju03019
]
107425756
Messenger RNA biogenesis [BR:
zju03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107425756
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
ORC-CDC6-like
AAA_15
nSTAND3
SMC_N
AAA_23
AAA_28
AAA_22
NACHT
AAA
PduV-EutP
Zeta_toxin
PriX
SRP54
AAA_18
AAA_5
AAA_25
AAA_33
AAA_24
Arf
AAA_14
AAA_16
AAA_30
AAA_7
Motif
Other DBs
NCBI-GeneID:
107425756
NCBI-ProteinID:
XP_015891270
UniProt:
A0A6P4AB19
LinkDB
All DBs
Position
9:join(5051562..5051739,5051892..5052052,5052427..5052478,5052818..5052954,5053340..5053426,5053710..5053997)
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AA seq
300 aa
AA seq
DB search
MEDRGSLKPEEEGSKYESSSSIKVYGMQFSYDGQTPLFADFNLDISPGSRCLLVGANGSG
KTTLLKILAGKHMVGERDVVRVLNYSAFHDTHLVCSGDLAYLGGSWSKTVGSAGEIPLQG
DFSAEHMIFGVEGADPVRRDKLIELLDIDLQWRMHKVSDGQRRRVQICMGLLHPFKVLLL
DEVTVDLDVVARMDLLEFFKEECDQRGATIVYATHIFDGLETWATHLAYIQDGDLRRAEK
LSEVNELKNSANLLSVVESWLRSEIKHEKKKPINPPSQIRKTSPFGTSPFVSSRHMAYYR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggaggatagaggaagcttgaagcctgaggaagaaggctccaagtatgagagctcgagc
agtatcaaagtgtatggcatgcaattctcttacgatggacaaaccccactatttgccgac
ttcaatctcgatatctcccctggatctcgatgtcttctcgtcggcgcaaacggatctggg
aaaaccacactgttgaagatcctagcaggaaagcatatggttggcgaaagagatgttgtg
agggtgttgaattattcggcttttcatgacacccatctggtttgtagcggtgatttggcc
tatttgggaggatcttggagtaaaactgttggttctgctggagagattccgctccagggg
gatttctctgctgagcatatgatatttggagtggaaggggctgatcctgttagaagagat
aagttgattgagttacttgatattgacctccagtggcgaatgcataaagtatcagatggg
cagaggcgtcgagtccaaatctgcatgggacttcttcacccgtttaaggttcttttgctt
gatgaggtaacagtcgacttagatgttgttgctaggatggacttacttgaattcttcaag
gaagaatgtgatcagagaggagcaacaattgtatatgcaacccacatctttgatgggttg
gaaacatgggcaacacatctggcatacatccaagatggtgatctgaggagagcggagaag
ttatcagaggttaatgagttaaagaactcggccaatctgctgtctgttgttgagtcctgg
cttcgttctgaaatcaagcacgaaaaaaagaaacccatcaaccctccttctcaaatccga
aagacatctccttttggtacttctccttttgtctcatctagacacatggcgtactaccga
tag
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