Ziziphus jujuba (Chinese jujube): 107426439
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Entry
107426439 CDS
T04794
Name
(RefSeq) transcription factor BHLH42
KO
K28363
basic helix-loop-helix transcription factor family protein
Organism
zju
Ziziphus jujuba (Chinese jujube)
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zju03000
]
107426439
Transcription factors [BR:
zju03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107426439
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH-MYC_N
bHLH-TF_ACT-like_plant
HLH
bHLH_IRO3
bHLH_SAC51
ACT_ACR9_3rd
Caskin-Pro-rich
bHLH_NCOA
ACT_4
Motif
Other DBs
NCBI-GeneID:
107426439
NCBI-ProteinID:
XP_015892114
UniProt:
A0A6P4AB96
LinkDB
All DBs
Position
9:join(2918060..2918163,2918249..2918503,2919844..2919940,2920464..2920478,2920582..2920638,2920757..2921339,2921896..2922812,2922901..2922990)
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AA seq
705 aa
AA seq
DB search
MDAPPSSHLQSMLQAAVQSVQWTYSLFWQFCPQQGILVWADGYYNGAIKTRKTVQPMEVT
AEEASLQRSQQLRELYDSLSAGETNQPARRPCASLSPEDLTESEWFYLMCVSFSFPPGIG
LPGKAYTRRQHVWLTGANEVDSKIFSRAILAKSARIQTVVCVPLLDGVVEFGTTEKVQED
LGFIQHVKTFFVDHQHQHPPPPPPKPALSEHSTSNPATSSDHPLFQSPPLPAIYTASDPP
ENRNLEDEDEELGEEEEEDEVEADSDSEAETGRDNALTVSAQNLPVSDSAAAAEPSELMQ
LEMSEDIRLGSPDDASNNLDSDFHLLAVSQSGNHPEDHQRRADSYRAESTRRWPMVTDTL
ESGLQPPPSSGAPLLDEFTQDTHYSQTVSNILQNQPSRWGDSSLPSINYVTCSTQSAFAK
WTFRSDHHDAPTEVTSQWLLKYILFSVPFLHTKYRDENSPKSRDADAASRFRKGTPQDEL
SANHVLAERRRREKLNERFIMLRSLVPFVTKMDKASILGDTIEYLKQLRKKIQDLEAHNR
QMEIDHQRSRSSEIQRTSSSGSLKDQQRSGVTAVDRARVGPPPPSDKRKLRIVEGSGGGA
KPKTVESPPPPLSPTSTATSVQVSIIECEGLLELQCQYREGLLLDVMQLLRDLRIETTTV
QSSLNNGTFVAELRAKVKENLNGKKTSIVEVKRAINQIIPHTDTL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaccgccgagtagtcatctccaaagcatgttacaagcggcggtgcaatctgtt
caatggacttacagtctcttctggcaattctgtccacaacaagggattttagtttgggca
gatgggtattacaatggagcaatcaagacaagaaagacagtacaacctatggaagttact
gctgaggaagcttcccttcagaggagtcagcagctcagagagctttacgactcgctgtct
gccggagagacaaaccaaccggcaaggcggccttgcgcatctttgtcaccagaggactta
actgagtcggagtggttctatttgatgtgcgtctcattttcatttcctccgggaattggg
ttgccgggaaaagcatatacaaggaggcagcatgtatggcttacgggtgcaaacgaggtt
gatagtaaaatcttttctagagccattctagccaagagtgctcgtattcagacagtggtg
tgcgttccgttactagacggcgtcgttgaatttggtacgacagaaaaggttcaagaggat
cttgggttcattcaacacgtcaagaccttcttcgtggaccatcaacaccaacaccctcct
cctcccccacccaaaccagcactctccgagcactccacttccaatcccgccacctcctcc
gaccaccctcttttccagtctcctcctctccccgccatttacaccgcatccgaccctcct
gaaaacagaaacctagaagacgaagacgaggagttaggagaagaagaggaggaagacgag
gtcgaagcagactcggactccgaggcagagacaggacgtgataatgctctgacagtgtcg
gcccagaaccttccggtttctgactcagctgcagcggccgagcccagcgagttaatgcag
ctggaaatgtcggaggatatccggttgggttcgcctgacgacgcatccaataatttggac
tcagattttcacttgctggccgtgagccagtcggggaaccacccagaggatcaccagcgg
cgagctgactcctatcgagccgagtcgacacggcggtggccgatggtaacggacacattg
gaaagtgggcttcaaccaccgccttcttctggagcccctctacttgacgaattcacacag
gacactcactactcgcaaaccgtatccaatatcctccagaaccagcccagcaggtggggg
gactcatcgttgccgtccatcaattacgtcacctgctccacccaatcggcatttgccaag
tggacgttccgttcagaccaccacgatgctcctacggaggtcacttcccagtggcttctg
aaatacatactgttcagcgtgccgttcctccacaccaagtaccgcgacgagaactcgccg
aaatcgagggacgccgacgccgcctctcgcttccgcaaaggcactccgcaagacgagctc
agcgccaaccatgtcttggccgaacgacgccgtcgcgagaagctgaacgagaggttcatc
atgctcaggtccttagttcccttcgtcaccaaaatggacaaggcctccattttaggggac
acgatcgagtacttgaagcaactcaggaagaagattcaggatctcgaggcgcataaccgg
cagatggagatcgatcaccaacggtcgagatccagtgagatacagaggacgagcagcagt
ggtagtttgaaagaccaacagaggagcggggtcaccgctgtggatcgggcccgggtcggc
ccaccgcccccgtcggataaaaggaagttgagaatcgtagaggggagtggcggcggtgcg
aagccgaagacggtggagtcgccgcctccgccattatcgccgacatcgacggcgacgtcg
gtacaggtgtcgatcatagagtgcgagggtttgttggagctgcagtgtcagtatagagaa
gggttattactggatgtgatgcaattgcttcgggacctacggattgagaccactacagtc
cagtcctccttgaataacggcaccttcgtagctgaactaagggccaaggtgaaggagaat
ttgaatgggaagaaaacgagcattgtggaggtgaagagagcaataaatcaaataataccc
catactgacacgttatag
DBGET
integrated database retrieval system
