KEGG   Ziziphus jujuba (Chinese jujube): 107433834
Entry
107433834         CDS       T04794                                 
Name
(RefSeq) uncharacterized protein LOC107433834
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
zju  Ziziphus jujuba (Chinese jujube)
Pathway
zju03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zju00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107433834
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zju03019]
    107433834
   03041 Spliceosome [BR:zju03041]
    107433834
   03032 DNA replication proteins [BR:zju03032]
    107433834
Messenger RNA biogenesis [BR:zju03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     107433834
Spliceosome [BR:zju03041]
 Complex A
  U1 snRNP components
   Sm proteins
    107433834
  U2 snRNP components
    107433834
 Complex B
  U1 snRNP components
    107433834
  U4/U6.U5 tri-snRNP components
    107433834
 Complex C
  U2 snRNP components
    107433834
DNA replication proteins [BR:zju03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     107433834
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 107433834
NCBI-ProteinID: XP_015900682
UniProt: A0A6P4AQB6
LinkDB
Position
1:complement(13702769..13703623)
AA seq 284 aa
MSMSKSSKMLQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKSN
EEREDRRTLGLVLLRGEEVISMTVEGPPPQEESRAKAVSAAAMAGPGIGRAAGRGIPTAP
LTQAQPGLSGPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPPAPVIRPPAQMPGFPGQ
APPPMSRGPPPQVQPPQFAARPGGAPPQYQVPPPQFGQRPMGPPPPGQMMRGPPAPPRPG
MPAPPPPRPGMPPPPGGAVPMFGPPRPGMPPPPNPQNQQQNQQQ
NT seq 855 nt   +upstreamnt  +downstreamnt
atgtcgatgtcgaagagctccaagatgctccaatacatcaactaccgcatgcgggtcacc
atccaagatggtcgccagctcgtcggtaagttcatggccttcgaccgccacatgaatctc
gtcctcggcgactgcgaggagttccgcaaactccctccggccaaaggcaagaagagcaac
gaggagcgagaagaccgccgcaccctcggcctcgtcctcctccgcggcgaggaggtcatc
tccatgaccgttgagggcccaccgccacaggaagagtcacgtgccaaggccgtgagcgcc
gccgccatggccggtccgggtattggccgcgccgctggcagaggaatccccaccgctcca
ctcactcaggcccagcccggtctctccggcccagttcgcggtgttggtgggcctgcaccc
ggcatgatgcagccgcagatctcccgtccgccggtgcctcagctttcggctccgcccatg
acctatcccccggctccggttatccgacctcctgctcagatgccggggtttccaggtcag
gctccgcctcctatgtctcggggacctccgccgcaggttcagccaccgcaattcgctgct
cggcccggtggtgcgccgccgcagtatcaggttccgcctcctcagtttggtcagagaccc
atggggcctccgcctcctgggcaaatgatgagaggaccacctgctccgcctcgccctgga
atgcccgccccacctccgcctcgtcctggaatgccacctccacctggtggtgccgttcct
atgtttggaccaccacgccctggaatgcctcctccgccaaatcctcaaaaccaacagcaa
aatcagcaacaatga

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