Ziziphus jujuba (Chinese jujube): 112492854
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Entry
112492854 CDS
T04794
Name
(RefSeq) uncharacterized protein LOC112492854 isoform X2
KO
K12126
phytochrome-interacting factor 3
Organism
zju
Ziziphus jujuba (Chinese jujube)
Pathway
zju04075
Plant hormone signal transduction
zju04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
zju00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
112492854
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
112492854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zju03000
]
112492854
Transcription factors [BR:
zju03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
112492854
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
bHLH_NPAS4
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
112492854
NCBI-ProteinID:
XP_060667589
LinkDB
All DBs
Position
9:complement(join(714279..714314,714483..714905,715075..715140,715293..715358,715473..715583,715725..716991,717127..717188))
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AA seq
676 aa
AA seq
DB search
MDMRKSTQPRMTTTSFAAASMYEKEFMELVWEKGEIQVRGPSCRWKSDIVEAKGEKRGKL
GSIVNFGRATEDCDHGLKYTTPSVDHHYKPHPHPHHSHEFYSEKIAAAATAATGNNNDCR
IVPEYENENDCAEYENECPEYEYAHLKPAVNINDASKLERTITQTNHRLRAFPRRNCSDH
IDSTSLPEVVLERQAASAAHKITTTTTTTPSHSSHSSHDSHSHSHYGGQWFLGVGVASNH
QEKNSNKKWNKSRRNSNNLSHLSRGIRLATVPKPNNVATNVNAPCTCTAAAAATKYSIVT
DKDHQRRPDALGIVPNHHLGSLTANTASVKHLQINPTVKPLDLHYLSLRPHVPADEHSEA
FGNKVVALEEQLPHKKTKTPKISKPKTKTQTATGKYFTRPPPPVPSASVCSLGASNSPAH
AHAHAHPLKRTSEETEESAYPCKSVENEPTAQAVIKAAVAPGGGRSKRNRTPQIHNLSEK
RRRDTINKKMRELKELLPNCNKVDKVSMLDEAIEYLQTLQRQLQMLSMGNEIMAPQMMLP
AGAPHLCDPSMMRLSSSLLPCFPTTTSTSTSTSAGTGTGGHSNPYNSGFQMLPFPAYLLP
FSTIPLHSLVPPAISRPTTLFDQPYFASKYYSNPHFVHMFYNNNNNTPTNHVERSRTTQS
TSTHQGTHQNSKQCFA
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggatatgcgaaaatcaactcagccgaggatgacaactacctccttcgctgcagcctct
atgtatgagaaggagtttatggagttagtatgggaaaaaggtgagatccaagtgagagga
ccatcctgcaggtggaaaagtgatattgttgaagctaaaggagaaaagagaggcaagttg
gggagcattgtgaattttggaagagcaacagaggattgtgatcatggtttgaaatatact
actcctagtgttgatcatcattacaaacctcaccctcatcctcaccactctcatgagttc
tactcagaaaaaattgctgctgctgccacggcggccactgggaataataatgattgccgt
attgttccagaatacgaaaatgaaaatgattgtgcagaatatgaaaatgaatgtccagaa
tatgaatatgcacatttaaaaccagcagtgaatattaacgatgcatcgaagttggagaga
actatcactcagactaatcatcggctgagagctttcccacggaggaattgtagtgatcac
attgattcaacctccttgccagaagtagtgctagagcgccaagctgcttctgctgctcat
aaaataactactacaacaacaacaactccttctcattcttctcattcttctcatgattct
cattctcattctcattatggtggccagtggttcctaggagtaggagtagcaagtaatcat
caagagaagaattcgaacaagaagtggaacaagagtaggaggaacagcaacaacttgtcc
cacttgtccagaggaataagacttgcaactgttcctaaacctaataatgtagctactaat
gttaatgcaccttgcacttgcaccgctgctgctgctgctaccaagtactcaatcgtcacg
gacaaagatcatcagaggcgcccggatgctttaggcatcgttcccaaccatcatcttgga
tcgcttactgctaatactgctagtgtcaaacatctccaaattaatccaaccgtcaaacca
ctagatctacactacttatcccttcggcctcatgttccagccgatgagcactctgaagct
ttcggtaacaaagttgttgccttagaagaacaacttccccacaagaaaacgaaaaccccc
aaaatctcaaaaccaaaaacgaaaacccaaactgcaactggaaagtacttcacacgacct
cctcctcctgttccatcagcttcagtatgctctctgggagcttcaaatagcccagcacac
gcacacgcacacgcacaccctctgaagcgcacatctgaggaaactgaagagtctgcctat
ccatgtaaaagtgttgaaaatgaacccacggctcaggctgttataaaagcagcagttgct
cccggaggaggtagatccaagagaaaccgaactccacaaatccataatttgtccgaaaag
aggcgaagagataccatcaacaagaagatgcgggagttaaaagagctcttacccaattgc
aataaggtggacaaagtttcaatgcttgacgaggccattgagtatctccagacccttcag
cgtcaattacagatgttgtcgatgggaaacgagattatggcgcctcaaatgatgctgcct
gctggagcgccacatttgtgtgatccatcgatgatgagactaagcagcagcttactcccc
tgcttccctacgactactagtactagtactagcactagcgctggcactggaactggtggt
cattctaatccttataattctggatttcagatgcttcccttccctgcttatctgcttccc
ttcagtactattcctcttcattccctcgtaccacccgctatctccaggcccaccaccctt
tttgatcagccttattttgcttccaaatattattcaaacccccatttcgtccatatgttt
tacaacaacaacaacaacactcctacaaatcatgttgagcgctccaggactacccaatca
acttctactcatcagggaacccaccaaaactcaaaacaatgttttgcttag
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