KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135441792
Entry
135441792         CDS       T09958                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like
  KO
K06752  MHC class II antigen
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04145  Phagosome
zle04514  Cell adhesion molecules
zle04672  Intestinal immune network for IgA production
zle05164  Influenza A
zle05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:zle00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    135441792
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    135441792
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    135441792
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    135441792
   05168 Herpes simplex virus 1 infection
    135441792
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zle04147]
    135441792
Exosome [BR:zle04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   135441792
  Exosomal proteins of epithelial cells
   135441792
  Exosomal proteins of breast milk
   135441792
SSDB
Motif
Pfam: MHC_II_alpha C1-set
Other DBs
NCBI-GeneID: 135441792
NCBI-ProteinID: XP_064557411
LinkDB
Position
Unknown
AA seq 254 aa
MDGARSLPRLLPLLALTLPPILGVQVQHSIIQTEFYQKSLDPPFDSSEFMFDFDGDEIFH
VEQEETVWRLPEFQQFASFEAQGALQNLAIDKQNLDNSMAAYNRSRAESVPPEVAVFPKH
PVEQDEPNVLICSVTKFWPPVLGLAWFRNGARVTEGVQETPFYPDRDFSFRKFSYLTFIP
QPGDYYDCKVEHEGLAAPSKTHWEPQIQAPKSEATETAICALGLAVGIVGIAAGTALIIR
GMKLGRAHPERGML
NT seq 765 nt   +upstreamnt  +downstreamnt
atggacggagcgcggagcctcccccggctgctgccgctgctggccctgaccctgcccccg
attctgggggtccaagtccagcacagcatcatccagaccgagttctaccagaagtccctg
gaccctccgttcgacagctccgagttcatgttcgactttgacggtgacgagattttccac
gtggagcaggaggagaccgtgtggcgcctgcccgagttccagcagttcgcgtccttcgag
gcgcagggcgcgctgcagaacctcgccatcgacaagcagaacctcgacaactccatggcc
gcctacaacaggtccagggccgagagtgtgccgccggaggtggccgtgttccccaagcac
ccggtggagcaggacgagcccaacgtcctcatctgctcggtgaccaagttctggccgccg
gtgctgggcctggcctggttccgcaacggcgcccgcgtcaccgagggcgtgcaggagacg
ccgttctaccccgaccgcgacttctccttccgcaagttctcctacctgaccttcatcccc
cagcccggggattattatgattgtaaggtggagcacgaggggctggcggcgcccagcaag
acgcattgggaaccccaaatccaggcgcccaaatcggaggccacggagacggcgatctgc
gccctgggcctggccgtgggcatcgtgggcatcgccgcgggcaccgccctcatcatccgc
gggatgaagctcggccgcgcccaccccgagcgcggcatgctctga

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