KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135442174
Entry
135442174         CDS       T09958                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, I-E beta chain-like
  KO
K06752  MHC class II antigen
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04145  Phagosome
zle04514  Cell adhesion molecules
zle04672  Intestinal immune network for IgA production
zle05164  Influenza A
zle05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:zle00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    135442174
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    135442174
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    135442174
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    135442174
   05168 Herpes simplex virus 1 infection
    135442174
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zle04147]
    135442174
Exosome [BR:zle04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   135442174
  Exosomal proteins of epithelial cells
   135442174
  Exosomal proteins of breast milk
   135442174
SSDB
Motif
Pfam: MHC_II_beta
Other DBs
NCBI-GeneID: 135442174
NCBI-ProteinID: XP_064557785
LinkDB
Position
Unknown
AA seq 189 aa
MGRGAAAGALLVALVVLGAPPAAGAELSGVFQEMRTRECHFINGTEKVRFVRRYIYNRKQ
YMMFDSDVGVFVGDTPYGETQARCCNGIPEILEDNRAAVDTFCRAGYELAAPFLTGHRGE
RGAERVPSGPALPMTLERLKTSLRISPEPSALLRNNPGASCPTQCPPWLSQSVPVHPCAC
PACPSRLSV
NT seq 570 nt   +upstreamnt  +downstreamnt
atggggcgaggggcggcagctggggccctgctggtggcactggtggtgctgggagccccc
ccggctgcgggcgcggagctctcgggggtgttccaggagatgagaacgagagagtgtcac
ttcattaatggtacggagaaggtgaggtttgtgaggaggtacatctacaaccggaagcag
tacatgatgttcgacagcgacgtgggggtgttcgtgggggacaccccctatggggagaca
caggctcggtgctgcaacggaatcccggaaatactggaggataatcgggctgcggtggac
acgttctgccgggccggctacgagcttgctgccccgttcctcacggggcaccgaggtgag
cgcggggcagagcgtgtcccctcgggccctgccctgccaatgaccctggagcgcctcaaa
acgtctctgagaatcagcccagagccctcagccctccttcggaacaaccccggggcctcc
tgtcccactcagtgtcccccgtggctctcccagtccgtcccagtccatccctgtgcctgc
ccggcgtgtccatcccggttgtccgtgtag

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