KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135442487
Entry
135442487         CDS       T09958                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03420  Nucleotide excision repair
zle04110  Cell cycle
zle04114  Oocyte meiosis
zle04120  Ubiquitin mediated proteolysis
zle04141  Protein processing in endoplasmic reticulum
zle04310  Wnt signaling pathway
zle04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:zle00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    135442487 (RBX1)
   04120 Ubiquitin mediated proteolysis
    135442487 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    135442487 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    135442487 (RBX1)
   04350 TGF-beta signaling pathway
    135442487 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    135442487 (RBX1)
   04114 Oocyte meiosis
    135442487 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zle04121]
    135442487 (RBX1)
   03400 DNA repair and recombination proteins [BR:zle03400]
    135442487 (RBX1)
Enzymes [BR:zle01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     135442487 (RBX1)
Ubiquitin system [BR:zle04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   135442487 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     135442487 (RBX1)
   Cul2 complex
     135442487 (RBX1)
   Cul3 complex
     135442487 (RBX1)
   Cul4 complex
     135442487 (RBX1)
   Cul7 complex
     135442487 (RBX1)
   Cul8 complex
     135442487 (RBX1)
   Cul9 complex
     135442487 (RBX1)
DNA repair and recombination proteins [BR:zle03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      135442487 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      135442487 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 135442487
NCBI-ProteinID: XP_064558413
LinkDB
Position
1A:complement(37969985..37980851)
AA seq 121 aa
MRAEQDGPIHAPKMAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRN
HIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYG
H
NT seq 366 nt   +upstreamnt  +downstreamnt
atgcgcgcggagcaggacgggccgattcacgcacccaaaatggcggccgcaatggatgtg
gacacccccagcggaaccaacagcggcgccggcaagaagcgcttcgaagtgaagaaatgg
aacgccgtggctctgtgggcatgggacattgtggttgataactgtgccatttgcagaaac
cacattatggatctgtgcatagaatgtcaagccaaccaagcatcggctacctctgaggag
tgcacagttgcatggggtgtctgcaatcatgctttccacttccactgcatctctcgctgg
ctcaaaactcgccaagtatgtccgctggacaacagggaatgggagttccaaaagtatgga
cactag

DBGET integrated database retrieval system