Zonotrichia leucophrys gambelii (white-crowned sparrow): 135443920
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Entry
135443920 CDS
T09958
Symbol
FYCO1
Name
(RefSeq) FYVE and coiled-coil domain-containing protein 1 isoform X1
KO
K21954
FYVE and coiled-coil domain-containing protein 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135443920 (FYCO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135443920 (FYCO1)
Membrane trafficking [BR:
zle04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
135443920 (FYCO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
RUN
GOLD_2
DUF7491
Motif
Other DBs
NCBI-GeneID:
135443920
NCBI-ProteinID:
XP_064560875
LinkDB
All DBs
Position
2:45037411..45082807
Genome browser
AA seq
1571 aa
AA seq
DB search
MAATSGESQLQRIIRDLQDAVTELSKEFKEGGEPITDDSVNLQKFSYKLEYLLQFDQKEK
STLLGNRKDYWDYFCDCLAKIKGANDGIRFVKSITELRTSLGKGRAFIRYSLVHQRLADT
LQQCFMNTKVTSDWYYARSPFLNSKMSSDIVGQLYELTDVQFDLASRGYDLDAAWPAFAR
RTLSSLGSSAYLWKPPSRSSSMSSLVSNYLQAQEFPSSPDVNNSLNVEHLEGYEEMRLEL
DQAELRQRELQDRIHQLEMENQELQAAVSLQKEQVQVEKEKSNNYSEENSRLTKMITELQ
KQCEVSHSTQSTVHDLQKCLQSLELSAAEQLKEHSTKVEQLLTSKEDCASKLQVSNQELE
TSRALIAVKDLCIDELKAKLSSTEQKNLNLLAKVDAALDEKGQQATAHYDSALQIRALLE
KLQEMEKEKADMQRLNAEHASQLKAAREELLLKEQAQKELESRYSSLTANSKEESEKLTG
SLETMAKEKDALQETLTLKGKEMAELQTQVMGSLAQVGSLEKNLEEARKEKEKLEEEYGR
REGALKQEVQSQAEQLELQEGRLTKVSQTVCSLQEQNQKLMSEKEHLRQKVKELEEQMEQ
QNSAVSELDEESRKLKAENENLQQSKKKMEEKLKNLEASKASLEADVAKLRASEKQLQSE
IDDALVSVDEKEKKLRSENKQLDEDLQNARRQSQILEERLEALHSEYEELKQREETSKES
YASLEAQLKSAKQHSLQMEKSLDTLKEREECLQLQLTQKEVELQGMESQCQQLRAEAERH
KKKAETLETEKLSVEKTCLHQTKLIESLTSEKESVEKQQLQQAASLEKEAKELAFRLTMS
EEQLEVNRGEVSRLQAEVLDLRVKLQQATDEKERMRGELAVTETVLSEQKTLVQQLKEQS
ESLNRNHVQELVECKEREEKLKKEQERTAHQKAELESNLMNLKEELSKVKRYLENARVEN
EENKDLLHRTNTDMAELGIQICALTSEKVDAEEQLAQATERFKELEEQAAEQQEKLKLDV
SNLREENKSLQEKLEEAQMCAAAVPSLQLQLETIKKQAQSFQETSQEELSAIKFQMSTEI
LNYQTKFKAVSEECGKVREQLEEQKRQQHAAEEEITELQAANTSLCRKLDEAREQLSESE
SARLQKEEEVTSLRELLERIQKEADEAKEKILDYTEKLSKVAADKDSSDQKLFAELDDLT
RTKQFLEERLIELIRDKDALWQKSDALEFQQKLSAEQKWQGDTEVNHCLDCQREFSWMVR
RHHCRMCGRIFCYYCCNNYMVTKLGGKKERCCRACFNKPRVIVDSTDDSGSSANQEGSPA
SLESPVSPSERAFVASEASKPPDDAAFDIITDEELCQVQESDSLHNESQIERDSLDQSVT
DLCVCWAKQLLGALYSLQSPFQVSAFHTIRNSTSSTFDESEDWQVAQDAEICLLKSGEIM
MKLPLTVEEIMNFGESNRELFIKSSTYSIIPITVTEMGLTISWIFSSDPKSISFSVVYQE
ADDTPLDQCKVLIPMTRCNSHKETIRGQVKVRNAGIYTLIFDNTFSRFISKRVFYHLAVE
RPVIYDGSDFP
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atggcagccacgagtggcgaaagccagctgcagcggattatcagagacttgcaagatgca
gtgactgaattaagtaaagaatttaaagaaggaggcgaaccgatcacagacgacagtgtc
aacttgcaaaaattctcctacaagcttgagtacctcttacagtttgaccagaaagaaaaa
agcacattgctggggaacagaaaagactactgggattatttctgtgattgtctggcaaaa
atcaaaggagctaatgatggaatccgctttgtcaagtctattacagaactacgaacctct
cttggaaaaggaagagcatttattcgttattccctggttcaccaaaggctagcagacacc
ttgcagcaatgttttatgaacaccaaagtgaccagtgactggtactatgcaagaagtcca
tttctgaattccaaaatgagttctgacattgtgggtcaactctatgagctcactgatgtt
caatttgacttggcatcaagaggctatgatttagatgctgcttggccagcatttgccagg
aggactctgtcctcacttggatcttcagcatatttatggaagcccccaagtcgcagttcc
agcatgagcagtttagtgagcaattatttgcaggcacaagagtttccttccagccctgat
gtgaataactcactaaatgttgaacaccttgagggctacgaagagatgcgtttagaactt
gaccaggctgagctgaggcagagggaacttcaagatcgtattcaccagctagaaatggaa
aaccaggagctccaggcagctgtcagccttcaaaaggaacaagtacaggtagaaaaggag
aagagcaataactacagtgaggagaactcccggctgacaaagatgatcacagagttacag
aagcagtgtgaggtctcacactccactcagagcactgtgcatgacctgcagaagtgccta
cagtcactggaactgagtgcagcggagcagctgaaggaacactcaacaaaggtggagcag
ctgttgaccagcaaggaagattgtgcctcaaaattgcaggtttcaaatcaggagctggag
acctctagggctttgattgctgtgaaggatctttgcattgatgagctcaaagccaagctg
agttccacagaacagaagaacctcaacctccttgcaaaagttgatgctgccttggacgaa
aagggacagcaagccacagcccactatgactctgccctacaaatacgcgcactgttagag
aagcttcaggagatggaaaaggaaaaggcagatatgcaaagacttaatgctgaacatgca
tctcagctgaaagcagcaagggaggagctgctgctgaaagaacaggcacagaaggaactc
gaatccagatacagtagcctcactgctaactccaaagaagagagtgaaaagctgactggg
agcctggagaccatggcaaaggaaaaggatgcacttcaggagaccctgactctgaaagga
aaggagatggctgagcttcagacccaggtaatggggtcgctggctcaggtgggttcactg
gaaaaaaatcttgaggaagccaggaaggaaaaagaaaaacttgaggaggagtatggtagg
agagaaggagcactgaagcaggaagtccagtcacaagcagagcaacttgaactacaggag
ggtcgcttaacaaaggtgagtcagactgtgtgtagccttcaggagcaaaaccagaaactc
atgtctgagaaggagcatctcaggcagaaagtcaaggagctggaggagcagatggagcag
caaaactctgcagtgagtgaactggatgaggagagcaggaaactgaaagcagagaatgaa
aatttgcagcagtctaagaagaagatggaagagaagctgaaaaatctggaagcttctaaa
gcttccctagaagccgatgtagccaagttgagagcctctgagaaacaacttcagagtgag
atagatgatgctctggtgtctgttgatgaaaaagagaagaagctccggagtgagaacaaa
cagctggatgaagacttgcagaatgccaggaggcaaagccaaattctagaggagaggctg
gaggctctgcactcagaatatgaagaactaaagcaaagagaagagacctccaaggagtct
tatgcttcacttgaagcacagctgaagagtgccaaacagcatagtttacaaatggaaaaa
agcttggacaccttgaaggaaagagaagagtgtctccagttgcagctcacacagaaggaa
gtagaactgcagggcatggagagccaatgtcagcagctaagagcagaagctgaaagacac
aagaagaaagcagagactcttgagacagaaaagctcagtgttgaaaagacatgccttcat
cagacaaaacttatagaatctctcacatcagaaaaggaatcagtggaaaaacagcaacta
cagcaggcagcgtccctggagaaggaagcaaaagagttggccttcagactgaccatgagt
gaagagcagctggaggtcaacagaggtgaagtgtccaggctgcaggcagaagtcctggat
ctgcgagtcaagcttcagcaggccactgatgagaaagagaggatgagaggtgagctggca
gtcactgagactgtcttgagcgagcagaagacgcttgtccagcagctgaaggagcagagt
gagtctctcaacagaaatcatgtgcaagaactggtggaatgtaaagaaagggaagaaaag
ctgaaaaaagagcaggagagaacagcccatcaaaaagctgagctggaaagtaatttgatg
aacctaaaggaagagctgtctaaggttaagcggtatttggaaaatgctagagtggaaaat
gaagaaaataaagatctcctccacaggaccaacactgatatggctgaacttggcattcag
atttgtgccttgacctctgaaaaagtggatgcagaagagcagttggcccaggccacggaa
aggttcaaagaactggaagaacaggcagcagagcaacaggagaagctgaagcttgacgtc
tctaatctcagagaggagaacaagagcctgcaagagaaattagaggaggctcaaatgtgt
gccgcagctgtcccaagtctgcagttgcagctggagacaataaagaaacaggcacagagt
ttccaagagaccagccaagaagagctgtctgcaataaaatttcaaatgagcacagagatt
ctaaattatcagacaaaattcaaggctgtcagtgaggagtgtgggaaagtaagagagcaa
cttgaggagcaaaagcgacaacagcatgcagcggaggaagagattacagagctacaagct
gcaaacacgagtttgtgtagaaagttggatgaagctagagagcaactgtcagaatcagaa
tctgctcggctgcagaaggaagaggaagtgacttctcttagagaactcttggaaaggatc
caaaaagaagctgatgaagcaaaagagaagatcctggattacactgagaagctcagcaag
gtggcagcagataaagatagtagtgaccagaagttatttgctgagctggatgacctgaca
agaacaaagcagttccttgaagaacgtttgatagagcttatcagagataaggatgctttg
tggcaaaagtctgatgctctggagttccagcagaagcttagtgcagagcagaagtggcag
ggggacacagaagtcaatcactgtctggactgccagagagagttctcgtggatggtgcgc
cgacaccactgcagaatgtgtggccgcattttctgctactactgctgcaacaactacatg
gtaacaaagcttggtggaaaaaaggagcgttgctgcagagcttgctttaataagcctaga
gtcattgtggacagtacagatgactctggatccagtgccaaccaggaaggatcaccagct
tcattggaatcgcctgtgtcaccatctgagagagcatttgttgcaagtgaagcctctaaa
ccaccagatgatgcagcttttgatataatcactgatgaggagctgtgccaagtacaggaa
tcagactctctccacaatgaaagtcagatagaaagagactctctggatcaaagtgtgaca
gatctatgtgtttgctgggctaagcagctgttaggggctctgtacagcctccagtctccg
tttcaggtttctgcctttcacacaattcgaaacagcacttcttcaactttcgatgaatct
gaagactggcaagttgctcaagatgctgagatatgcttgttgaagtcaggagaaattatg
atgaaattaccccttacagtagaagagatcatgaattttggagaaagcaacagagaactg
ttcatcaaatccagcacctacagcataattcccatcactgttacagagatgggactaaca
atcagctggatcttctcatcagaccccaaaagcatatccttcagtgttgtctaccaagag
gccgacgacacgccgctggatcagtgcaaagttcttatccctatgactcgctgcaactct
cataaggaaactatcagaggacaggtgaaagtcagaaacgctggaatctacaccctgata
tttgacaacacattctctaggtttatctcaaaaagggtgttttatcacttggctgttgag
cgacctgtcatctatgatggaagtgattttccatag
DBGET
integrated database retrieval system
