Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444090
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Entry
135444090 CDS
T09958
Symbol
TTC3
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135444090 (TTC3)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135444090 (TTC3)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135444090 (TTC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
WHD_TTC3
TTC3_9th
zf-RING_2
zf-C3HC4_2
TPR_1
zf-rbx1
TPR_BSK1_C
zf-C3HC4
TPR_11
TPR_2
TPR_17
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
135444090
NCBI-ProteinID:
XP_064561309
LinkDB
All DBs
Position
1:2787307..2917211
Genome browser
AA seq
1920 aa
AA seq
DB search
MADPLSKSDLVAALALFAGDPTYFQLDHGTFGQTVPCKPKTGVDPCEVWCSLPVEKLREI
CNVIKIRIFWCALFTRESTAFLDTFCLMFLDWDMKKVHEFNVMEDLADLIKKVVNIPHFI
SGILRIGTGIENGLFPLGEALDWVRSAGDPGMLQGLERMGDFGRVILAMFFSEWKRYITK
VALEDFDLVADLQALTCDSSRKKSEAMKQRGNAEFAQGALGSAIVSYTKAIEFCPTNHLL
YGNRALCFILTRQYGRAVLDGKRAIVLKPDWPKGHHHYCKALALLGKAELALAANARAQE
LCQGSPEGLRELLTQSQRLRGGRGTEQREKARKDLPEKKDRNSSKSPPGNCREQKGAGRE
RRRSRDEPEGAEMQEKVTEPQRAEGKGSTLEQPPNQSQQSKRKPKTKTCDHEKMRDHVDL
KREKAMEDKGFCAVPQVDFSCLPEAVKALARDGCRALQEQQCHSAELAFSRLLGILCASG
VAYMNNVNILNINYVIFLYGHATALLGMGHPEALAKAEVQFKKIIEQYPEESCFCLAHYG
IGRVYLRQNRFVHALDQFLRSKLMIDFNIVPGVLTWPGTTQVIEETRIENLQMALRNYIE
ECKFPPAPDAVCRYQQCHGYSKIQIYFTDPDFKGFIRVICCQQCRVEFHISCWKKLKTAS
YSDKNDKDFLKEICFTPDCKGLISKIVIFSPPGVVKCEFEQKIPKVKEPPRACIKQKCTS
LRNIKIKQEKKKWRKRAREAARNCARNSVRNCARNSAEEKQEGKEQPQGSQNRGAGQDLY
AGDQILQHLRRNAEKIKAAVPDPAGLLRELLAWGVMAEQDFSSSSQIHDSQEVLERLLSS
VVQERSRVRSRGFLHVLSRIHEVDAKVHKWLQHLDHLGLTATKNFLHQYGQVLQELDFSI
LTPLWNQRYGSKFDKVAADGEKKEICDYFLSPPLEKSRCFIWLLEENREHFPQLHQALDE
FFDKMDDPTIILKKQGNENLSNNEIKVKNKNRKKNLKDSKSILVLSSGISTAPREEEKIF
IEENNVDFPNENPFGVPEHLQDQLEEFEARYNIANNNNYQINNNNNPDPISENLYDYFSQ
ILEEHGPLEINNKLLIGEYENFPEETRKVVEDGGGLEAFLLKSLRFLMVDNLIGLQKHSA
LFEGDPSRNENKDENPTPGQCQGNPAHTKLPLNPYAQEFKPLSYPVEAPVAAAPDLSDYH
TPQYFPCSFPAPCTPGNPLENENIDSMESQAPFSGVLLEGFQPAGPAVFLPQSSWGYQYG
ILPLAQAGLIYADPAAPQEHLHSAIPSPELFVPAEIQQCKGPWGQLENSDKKDSALSNGS
DEAEGDKCVKKEKGKKNKGGVKSNPHTRMVAVQVNQEVADRETNTLPFHPFENQQGDILR
LQKEHRVLQEQLRQAQLKSEQSQSRSREEISALQGLLRKSIEESEVSQNELDWFHQDSEA
QMRKWQQEKKENRENLKALKGTAKKHSDTNERYLKSIEEKEKQYNASVKTFLKASKKFAN
EKSKLEELIKKSQNERQECEKRAVEAEISVLQSWKEAESCRLRGAIAKAQGNLRLLRALG
SSSASAAPVLKSQVDSWEIFISNVKKQLEKVEAEYEERMEQVGRGARGCLSRVEVVDLPW
PQGFVAMPLRAAVCDPAIVTCSAPAHPGALPAFPSSDGKAPAQPPLQAPSGATAAPEAPP
APGKAPDKHPRAPEGSHPAKIPPGAPGRNSQPAQPSQDPSALQQRPPAMPTNKKLPKKME
NILAQLQSVFPNCSSSELTASIREVQRRSGSSLSPSEILSRATELILDQQQLKAPPAGTA
LPSPGPAAPARPRAAPMDGPGPKTSAGKNPSQPNLQPWGSAGAIPKAKWRKQDSAACSED
PCSICHDELSSDCCELECGHHFHRECIRTWLKQHSSCPICRVHALLPEDFPELPAWNRPG
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctctctccaaatccgacctcgttgcagccttggctctctttgctggtgac
ccaacctactttcagctggatcatggaacctttgggcagacagtgccgtgtaaacctaaa
acaggagtggatccgtgcgaggtttggtgcagcctccccgtggagaaactgcgggaaatt
tgtaacgtgatcaaaatccgaatattctggtgcgcgctgttcaccagggagagcacggcc
ttcctggacaccttctgtttgatgttcctggactgggacatgaagaaagttcatgagttc
aatgtcatggaagacctcgctgatttaattaaaaaagttgttaacattccgcatttcatc
agtggcatcctgaggattggcactgggatagaaaatgggctgttcccgctgggcgaggcg
ctggactgggtgcgcagcgcgggggacccggggatgctgcagggcctggagcgcatgggc
gacttcggccgcgtcatcctggccatgttcttctcggagtggaagcgctacatcaccaag
gtggcgctggaggatttcgatctggtggccgatctgcaggccctgacctgcgacagctcc
aggaagaagagcgaggccatgaagcagagaggaaatgcagaatttgcccagggagccctg
ggctctgccatcgtctcctacaccaaagccatcgagttctgccctaccaaccacctgctg
tatgggaaccgagctctgtgcttcatcctcaccaggcagtacgggagagctgtccttgat
gggaaaagagccatcgttctcaagcctgactggccaaaggggcaccaccattactgcaag
gcgctggcgctgctgggcaaggcggagctggcgctggcggccaacgcgcgggcacaggag
ctgtgccagggcagccccgaggggctgcgcgagctcctcacacagagccagcggctgcgg
ggcggccggggtactgagcagagagagaaggcgaggaaggatctgccagagaaaaaggac
cgaaattcctccaaatctcctccagggaattgccgggagcagaaaggagcagggagggag
aggaggaggagccgggatgagcccgagggggcggaaatgcaggaaaaggtgaccgagccc
cagagggcagaaggcaaaggttccacgctggagcagcctccgaaccaaagccagcaaagc
aaacgaaagccaaaaaccaaaacttgtgaccatgaaaaaatgagggatcatgtggatttg
aagagggaaaaagccatggaggataaaggtttctgtgctgtgccacaggtggatttcagc
tgcctgcccgaggctgtgaaggcgctggcgcgcgatggctgccgggccctgcaggagcag
cagtgccacagcgccgagctcgccttctcccggctcctcggcatcctctgcgcctcgggc
gtggcgtatatgaataatgtaaatattcttaatattaattatgttatattcctctatgga
catgccactgccctcctgggaatgggacatcctgaggcattggcaaaagctgaagttcag
tttaagaaaataattgagcaatatccagaagaaagctgtttttgtttggcacactatgga
attggaagggtttacctcaggcaaaacaggtttgttcatgccctcgaccaattcctgagg
tcaaagctgatgattgatttcaatattgtccctggagttttaacctggccaggaacaact
caggtcatcgaggagacgcgaatagagaatttacagatggctttaaggaattatattgag
gaatgtaaattccccccagccccagatgctgtgtgtcgataccagcagtgccatggctac
tccaaaatccaaatatattttacagacccagactttaagggttttatacgtgttatctgc
tgccagcagtgtcgggtggaattccacatcagctgctggaaaaagctgaaaacagcaagc
tacagtgataaaaatgataaggatttccttaaggaaatttgttttactcctgattgtaaa
ggccttatttcaaaaatagttattttcagtcctcctggcgtggtaaaatgtgaatttgaa
caaaaaatcccaaaagtgaaggaaccaccaagggcctgtataaaacagaaatgcacaagc
ctcaggaacatcaaaataaagcaagaaaagaagaaatggcggaaaagagcgcgggaagca
gccaggaattgtgccaggaattctgtcaggaattgtgccaggaattcagctgaggaaaaa
caggaggggaaggagcagccccagggcagccagaacaggggagctggccaggatttatac
gccggcgaccaaatcctgcagcacctgcggcgcaatgccgagaagatcaaagccgctgtg
cccgaccctgccgggttactgagggaattgctggcctggggggtgatggcagagcaggat
ttcagctcctcttcccaaatccacgattcccaggaggtgctggagcggctgctgagctcc
gtggtccaggagaggagccgggtgcggagccgcggcttcctgcacgtgctgagccggatc
cacgaggtggatgccaaagtgcacaagtggctgcagcacctggatcacctgggtctgaca
gctacaaaaaacttcctccatcaatatggccaagttctgcaagagcttgatttttctatt
ttaaccccgctgtggaaccagagatatggcagtaaattcgataaggtggcagctgatggg
gaaaaaaaggaaatttgtgattatttcctctcccctcccctagagaaatcccggtgtttt
atttggctgttggaggaaaacagagaacatttccctcagctccatcaggctttagatgaa
ttctttgataaaatggatgatccaaccattatattaaagaaacaaggaaatgagaattta
tcaaataatgaaatcaaagttaaaaataaaaacaggaagaagaatttgaaagattcaaag
tctattttagtattatccagtggaattagtacagcaccacgagaagaagagaagatattt
atagaagaaaataatgtagattttccaaatgaaaatccctttggagtcccagaacatctc
caggatcaactggaggaattcgaagctcgttataatattgcaaataataacaattatcag
attaataataataataatccagatccaatctctgagaatttatatgattatttctctcaa
atcttggaagaacatggccctctggaaattaataataaattgctgattggggaatatgag
aatttccctgaggagacgcggaaggtggtggaagacgggggcggcctggaggccttcctg
ctgaaatccctgcgcttcctcatggtggataatctgataggcctgcagaaacactcggcc
ctttttgagggagatcccagcagaaatgagaataaagatgaaaatcccacacctgggcag
tgccaggggaaccctgcccacaccaagctgcccctcaacccctacgcccaggagttcaaa
cctctctcgtaccccgtggaggcccctgtggcagcagctcctgatttatccgattatcac
accccacaatatttcccctgctccttccctgctccctgcactcctggaaatcctctagaa
aacgaaaatattgattccatggaaagccaggctccgttttcaggtgttttactggaaggc
ttccagcctgcaggcccggctgtgtttttacctcagagctcctggggttatcagtatgga
atcttgcccctggcacaggctgggctcatttatgctgatcctgcagctcctcaggaacac
ctgcactcagcaatccccagcccggagctctttgtgccagctgaaatccagcagtgcaaa
ggcccctggggccaattggagaactcggataaaaaggattctgctttatcaaatggctcg
gatgaagctgagggtgataaatgtgttaaaaaggaaaaaggaaagaaaaataaaggcggg
gtgaagagcaatcctcacacaaggatggtggcagtgcaggtaaatcaggaagttgctgat
agggaaaccaatactttgcctttccatccatttgaaaatcaacagggtgacatcctgcgc
ctgcagaaggagcaccgggtgctgcaggagcagctccgccaggcccagctgaaatcggag
cagtcccagagccggagccgcgaggagatctcagctctgcaggggctcctgaggaaaagc
atcgaggagagcgaggtgtcccagaatgagctggattggttccaccaggactcggaggca
cagatgaggaaatggcagcaggagaagaaggagaaccgggagaatttaaaagctctgaag
ggcacagccaaaaaacactcggacaccaacgagaggtatttgaagagcattgaggagaag
gaaaagcaatataatgcaagtgtaaagacatttctgaaggccagtaagaaatttgctaat
gagaaaagcaaattggaagagctgatcaaaaagagtcagaatgagaggcaggagtgtgag
aaaagagctgttgaagcagagatctcggtgctgcagagctggaaggaagccgagagctgc
aggctcaggggcgccattgccaaggcccaggggaacctgcggctgctgcgggcgctgggc
agcagctcagcttctgcagctcccgtgttgaagtcccaggttgattcctgggaaatattt
atatcaaatgtcaagaaacaactggaaaaagtcgaggccgagtacgaggagaggatggag
caggtggggaggggggcccggggctgcctcagcagagtggaggttgtggatttgccatgg
ccccagggctttgtggcaatgccgctcagagctgccgtgtgtgaccctgccattgtcacc
tgctcagcgcctgcccatcccggtgccctccctgcgtttcccagctccgatggaaaagct
ccagcccagcctcccctgcaggcacccagcggagccacggcggcccctgaggctcctcct
gcccccgggaaagctccagacaaacatccccgagctccagagggatcacatcccgctaaa
atcccaccaggagctcctgggaggaactcccagcctgcccagcccagccaggatccctca
gctctgcagcagaggccgcctgcaatgccaaccaacaaaaagcttccaaaaaaaatggaa
aatattttagcccagctgcagagtgtattcccaaactgcagcagctcagagctcacggcc
tccatccgggaggtgcagaggaggagcgggagcagcctgagccccagtgaaatcctcagc
agggccacggagctcatcctggaccagcagcagctcaaggccccgccagcgggcacagcc
ctgccctcaccaggccctgctgcccccgcccggcccagggcagcgcccatggatggaccc
ggccccaaaacctccgcgggcaaaaacccctcccagcccaacctgcagccctggggcagt
gctggagcaatccccaaagccaagtggaggaagcaggacagtgctgcctgcagtgaggat
ccctgcagcatctgccacgatgagctgagcagtgactgctgtgagctcgagtgtggccat
cacttccacagagagtgcatccggacgtggctcaagcagcactccagctgccccatctgc
cgcgtgcacgctctgctgcccgaggacttccccgagctgccggcctggaaccggcccggc
tga
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