Zonotrichia leucophrys gambelii (white-crowned sparrow): 135444172
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Entry
135444172 CDS
T09958
Symbol
TNFRSF11A
Name
(RefSeq) tumor necrosis factor receptor superfamily member 11A isoform X1
KO
K05147
tumor necrosis factor receptor superfamily member 11A
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
135444172 (TNFRSF11A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
zle04050
]
135444172 (TNFRSF11A)
04090 CD molecules [BR:
zle04090
]
135444172 (TNFRSF11A)
Cytokine receptors [BR:
zle04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
135444172 (TNFRSF11A)
CD molecules [BR:
zle04090
]
Proteins
135444172 (TNFRSF11A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RANK_CRD_2
TNFR_c6
AI-2E_transport
CrgA
RELT
TMEM154
Motif
Other DBs
NCBI-GeneID:
135444172
NCBI-ProteinID:
XP_064561493
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Position
2:complement(71152781..71180911)
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AA seq
665 aa
AA seq
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MPVPSGCWLLLLCLAAAGKQLSLQITPPCESEQHYEYLGRCCRKCEPGKYLSARCTATSD
SVCQPCGPNEYMDVWNEEDKCLLHKICDQGKALREVNPGNSTFQRQCACTMGYHWNEDCD
CCQRNTMCAPGLGVKPPVQQDRDTMCVPCPRGYFSKVSSSTDECKSWTNCTALGMEEIVP
GTDKSDAVCKERKMLEPSEDGTNRILYVLIVVLFFVTLIGIVVFIVYYKKKGKKLTADLQ
NWANEVCSQIKGTKELPRDALVSVNITNAPVPQTAEGTCLLVPSGSPVPGKSCCTSGHTA
CRNESPSTEPCETGDFSVVTETDDYQFPPVPTEDEYMDKDLNNTDYLSLLSQTASKTVSS
FSQPMEAGENDSLNQYFSGIGSTEDVSVSPGFHPPSNTDGAHVATDQLLQKSCQHAHSCP
KETGNKDTDNFATNCDSKKICVRCGILYRESPQKCYKPCRAAADSTSTSPETGSCAQCTC
GLNFLSAGQSTLGNNLGMEDAPSDSTNVKYQNTNGSTSGTQSSTSGTQSSTSDLPPASGN
VTGNSNSTFISSGQVMNFKGDIIVVYLSQNSQEGTAASSGLSEDHVGSPVQEENLSRCET
FAGNAQHYKEKCAELQGARPAPGSGGPRWPGGALAQEWGPSCGGQASQPVQEEGKLGHFS
EKVLN
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcccgtcaggctgctggctccttctcctgtgcctcgctgccgccggcaagcag
ctgtcactacaaatcactccgccgtgtgagagcgagcaacactatgagtacttgggacgg
tgctgcaggaagtgtgagccagggaagtatttgtctgctagatgcactgctacttctgat
agcgtgtgccagccatgtggcccaaacgagtatatggatgtctggaatgaagaagataaa
tgcttactacataaaatatgtgatcaaggaaaggccttgagagaagtgaacccagggaac
agcacgttccagcggcagtgtgcttgtacgatgggctaccactggaacgaggactgcgac
tgctgccagagaaataccatgtgtgctcccggactcggagtcaagcctcctgtgcaacaa
gacagggacacaatgtgtgtaccgtgtcccagaggctacttctcaaaggtctcttcatcc
actgacgagtgtaaatcctggaccaactgtacagctctaggaatggaagaaattgtgcct
gggactgacaagtctgatgcagtttgtaaagaacggaagatgcttgagccatcagaagat
ggaacaaacaggatcttgtacgtgttgattgtcgtcttgttttttgtgacactaattggc
attgtcgtcttcattgtatactacaagaagaaggggaaaaagctgacagcagatctacag
aactgggctaatgaagtgtgcagccaaataaaaggaacaaaggaactccccagagatgca
cttgtttctgtgaacatcacaaatgctcctgtcccccagactgctgaaggcacatgtctc
ctggtcccctcgggctctcctgtccctggaaaatcgtgctgcacctctggtcacactgct
tgcaggaatgagagccccagcacagagccttgcgagacaggagacttttctgtagtaacc
gagactgatgattaccaattcccaccagttcccacggaagatgagtacatggataaggac
ctcaataacactgattatttatctttgctaagtcagactgcaagtaaaactgtgtcatca
ttttcacaaccaatggaggcaggggagaacgacagcttgaaccagtacttttcaggtatt
gggagcacagaggacgtatcagtctctccaggctttcaccctccctccaacacagatggg
gcacacgttgccacggaccagcttctacagaaatcttgccaacatgcccacagttgcccg
aaggaaacaggcaacaaagacacagataattttgcaacaaactgtgactcaaagaagatc
tgtgtgaggtgtggcattttgtacagagaatctccccaaaagtgttacaaaccctgtcgt
gctgcagctgacagcacctccacctccccagaaactggttcctgtgcccagtgcacctgt
ggtttgaattttctctctgctggtcagagcactctaggaaacaatcttggtatggaagat
gcaccttcagacagtactaacgtgaagtaccagaacacaaatggaagcacttcagggaca
cagagcagcacttcagggacacagagcagcacttcagacctccctccagcatctggaaat
gtgactggaaacagtaactccacctttatttcaagtggacaagtaatgaatttcaagggc
gacatcatcgttgtgtaccttagccagaactctcaggaggggacggcggcctcctcgggg
ctgagcgaggaccacgtgggcagcccggtgcaggaggagaacctcagccgctgcgagacc
ttcgccggcaacgcccagcactacaaggagaagtgtgcggagctgcagggcgcccgcccg
gccccgggcagcgggggaccacggtggcctggtggagccctggcccaggagtggggcccc
tcctgcggtggccaagcctcccagcccgtgcaggaggaggggaagctgggacacttctcg
gagaaggtgttgaactga
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