Zonotrichia leucophrys gambelii (white-crowned sparrow): 135445833
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Entry
135445833 CDS
T09958
Symbol
BABAM2
Name
(RefSeq) BRISC and BRCA1-A complex member 2
KO
K12173
BRCA1-A complex subunit BRE
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135445833 (BABAM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135445833 (BABAM2)
03036 Chromosome and associated proteins [BR:
zle03036
]
135445833 (BABAM2)
03400 DNA repair and recombination proteins [BR:
zle03400
]
135445833 (BABAM2)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
135445833 (BABAM2)
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
135445833 (BABAM2)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
135445833 (BABAM2)
DNA repair and recombination proteins [BR:
zle03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
135445833 (BABAM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE
UL17
Motif
Other DBs
NCBI-GeneID:
135445833
NCBI-ProteinID:
XP_064564997
LinkDB
All DBs
Position
3:78363626..78525847
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AA seq
383 aa
AA seq
DB search
MSPEVALNRISPALSPFISSVVRNGKVGLDATNCLRITDLKSGCTSLTPGPSCDRFKLHI
PYAGETLKWDIIFNAHYPDLPPDFIFGEDAEFLPDPSALHNLASWNPSNPECLLLVVKEL
VQQYHQFQCSRLRESSRLMFEYQTLLEEPQYGENMEIYAGKKNNWTGEFSARFLLKLPVD
FSNIPTYLLKDVNEDPGEDVALLSVSFEDAEATQVFPKLYLSPRIEHALGGSSALHIPAF
PGGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFLSHFGTGVVEYDAEGFTKLTLL
LMWKDFCFLVHIDLPLYFPRDQPTLTFQSVYHFTNSGQLYSQAQKNYPYSPRWDGNEMAK
RAKTYFKTFVPQFQEAAFANGKL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctgaagtggccttgaacagaatttctccagcactttcgcccttcatttccagt
gtggtcaggaatggaaaagtaggactagatgctacgaattgtttacggattacagacttg
aagtctggttgtacatccttgacccctggacccagctgtgatcgttttaaactgcatatc
ccttatgcaggagaaacactcaaatgggatataattttcaatgctcactatcctgaccta
ccaccagattttatctttggagaggatgctgagtttttgccagatccttctgccttgcat
aatttagcttcctggaatccttcaaaccctgaatgcttgctgcttgttgtgaaagagctt
gtgcagcagtatcatcaatttcaatgcagccggttacgggagagttctcgtctcatgttt
gagtatcagactttacttgaagagccccagtatggagaaaacatggaaatctatgctggc
aaaaaaaacaactggactggagaattctcagctcgcttcctcttgaagttgcctgtcgat
ttcagcaatattcctacatacctgcttaaggatgtgaatgaagaccctggagaagatgtt
gcactcctctctgtcagttttgaggatgctgaagccactcaggtttttcctaagctgtac
ctctccccgcgtattgaacatgcacttggaggatcatctgcccttcacatcccagccttt
cctggtggaggttgtctcatcgactacgtaccccaagtatgccagcttctaacaaacaag
gtacaatatgttattcagggataccataagagaagagagtacattgcagctttcctgagt
cacttcggaactggtgtggtggaatatgatgcagaaggattcacaaagcttactctgttg
ctgatgtggaaagatttttgcttccttgttcacattgacctacccctctattttcctcga
gaccagccaaccctaacatttcagtctgtgtaccacttcactaacagtggccagctgtac
tcccaggcccagaagaattacccatacagccccagatgggatggcaatgaaatggccaag
agagcaaagacatatttcaagacatttgtccctcagttccaggaggcagcatttgctaat
gggaagctttag
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