Zonotrichia leucophrys gambelii (white-crowned sparrow): 135447890
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Entry
135447890 CDS
T09958
Symbol
TRPC5
Name
(RefSeq) short transient receptor potential channel 5
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zle01009
]
135447890 (TRPC5)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
zle04040
]
135447890 (TRPC5)
Protein phosphatases and associated proteins [BR:
zle01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
135447890 (TRPC5)
Ion channels [BR:
zle04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
135447890 (TRPC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
DUF1340
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
135447890
NCBI-ProteinID:
XP_064569139
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All DBs
Position
4A:2943837..3047438
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AA seq
989 aa
AA seq
DB search
MAQLYYKKVNFSPYRDRIPLQIVRAEAELSSEEKAYLSAVEKGDYASVKHALQEAEIYYN
ININCMDPLGRSALLIAIENENLEIMELLLSHSVYVGDALLYAIRKEVVGAVELLLNYRK
PSGEKQVPTLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRRVTIPRPHQIRCNCVE
CVSSSEVDSLRHSRSRLNIYKALASPSLIALSSEDPILTAFRLGWELKELSKVENEFKAE
YEELSQQCKRFAKDLLDQARSSRELEIILNHRDDQSEELDPQKCHDLAKLKVAIKYHQKE
FVAQPNCQQLLATLWYDGFPGWRRKHWAVKLLTCVTIGLLFPVLSVAYLIAPKSRLGLFI
KKPFIKFICHTGSYLTFLFMLLLASQHIVRTDLHMQGPPPTIVEWMILPWVLGFIWGEIK
EMWDGGFNEYVHDWWNLMDFAMNSLYLATISLKIVAYVKYNGSRPREEWEMWHPTLIAEA
LFAISNILSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQLYF
YYETSASEEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFV
GATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGATLPPP
FNIVPSPKSVWYLCKWIHNQLCPGDDSDNEQKRHENLKTFTERHADNLIQNQHYQEVIRN
LVKRYVAAMIRTSKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPQRRSYSTSSTEVS
QKEETNEDNAAEKPRAKSVSFNVANKKKDFNVSALIKTMSGMNMVEEKPKSNGISKRSFV
RNGNRVQRLSSSKKESFKRLGLLFSKMNGHVPEPSSEPMYTISDGIIQPHYMWKDIKYSP
MDREREENCSKSEINLNEVAYSGNTRLTGQSKECPVVCTSSLHCASSICSSNSKLIDSSE
DVFDSWGEACDLFINQWKDGQEDHVTTRL
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctatactacaaaaaggtcaacttctccccgtaccgagaccggatcccactg
cagatcgtgcgagcggaggcagagctctcgtcggaagagaaagcctacctcagtgccgtg
gagaagggggactatgccagcgtgaaacatgccctgcaggaggcagagatctactacaac
atcaacatcaactgcatggatcctctggggcgcagtgccctgctcatagccatagagaat
gagaacctggagatcatggagctgctgctgagccacagcgtctacgtgggggacgcgctg
ctctacgccatacgcaaggaggtggtgggagctgtggagctgctgctcaactacaggaag
cccagtggtgaaaaacaggttccaacgctgatgatggacacccagttttcagagttcacc
ccagacatcacccccatcatgctggcggctcacaccaacaactacgagatcatcaaactg
ctcgtgcaaaggcgggtgaccatcccacggccgcaccagatcaggtgcaactgcgtggaa
tgcgtctccagctccgaggtggacagcctgaggcactccaggtcaaggctgaacatctac
aaagccttagccagcccttcgttgattgccttatcgagcgaggatcccatcctgaccgcc
ttccgcctgggctgggagctgaaggagctgagcaaggtggagaatgagttcaaggctgag
tatgaggagctgtcccagcagtgcaagcgttttgccaaggaccttttggaccaggcacgg
agctcccgggagctggagatcattctcaatcacagggacgatcagagcgaggagctggat
ccccagaagtgtcacgacttggcaaagctgaaggtagcaataaagtatcaccagaaagag
tttgtggctcagccaaactgccagcagctgctggcgacgctgtggtacgacggctttcca
ggctggaggaggaaacactgggcagtgaaactcctgacctgtgtcaccattgggctgctg
ttccccgtgctgtccgtggcatacctgattgcacccaagagcaggctgggactgttcatt
aaaaagccatttatcaagtttatctgccacaccggctcctacctgaccttcctgttcatg
ctcctgctggcgtcgcagcacatcgtcaggacggacctccacatgcaggggccacctccc
accatcgtggagtggatgatcctgccctgggttctaggtttcatctggggagaaatcaag
gaaatgtgggatggtggattcaatgagtacgtgcatgactggtggaatctgatggatttt
gcaatgaactccctctatcttgccactatctcccttaaaatcgttgcctatgtcaagtac
aacggctctcgcccgcgggaggagtgggagatgtggcacccgaccctgattgcagaagcc
ctctttgcaatatccaacatcctcagctccctgcgcctcatctccctgtttacagccaac
tcgcacctgggacccctgcagatttctctgggacgcatgctgctagacatcctcaaattc
ctttttatctactgcctggtgcttctggcttttgccaacggactgaaccagctttatttt
tattatgagaccagtgcctcggaggaacccaacaactgcaaggggatccgatgtgagaaa
cagaacaatgccttctccacgcttttcgagaccctccagtcactcttctggtctgtgttt
gggctgctgaatctctatgtgaccaacgtgaaagccagacatgagttcaccgagtttgtt
ggggccacgatgtttggcacctacaacgtcatctccctcgttgtgctgctgaacatgctc
atagccatgatgaacaactcctaccagctcattgctgaccacgcggacatcgagtggaag
tttgcgcggacgaagctctggatgagttactttgatgaaggcgccactctgccccctcct
ttcaacattgtccccagccccaagtcggtctggtacctttgcaagtggatccacaaccag
ctgtgcccaggagatgactctgacaacgaacagaagaggcacgaaaacctcaaaacattc
acagaacgtcacgctgacaacctgattcagaatcaacattaccaggaagtgataagaaat
cttgtgaaaagatatgtcgctgcaatgataagaacttccaaaaccaacgaaggtttaact
gaagaaaacttcaaggaattaaaacaggacatctcgagctttcgctatgaagttcttgac
ctcttgggcaacaggaagccccagaggagaagttactctaccagcagcacagaggtgtcc
caaaaggaggagacaaacgaggacaatgctgcggaaaaacccagagccaagagcgtgtcc
ttcaatgtagccaacaagaagaaggacttcaacgtgtctgccctgattaaaaccatgtct
gggatgaacatggtggaggagaagccaaaaagcaacgggatcagcaagcgctcgttcgtg
cgcaacgggaaccgcgtgcagagactctccagctccaagaaggaatccttcaagaggctg
ggcctgctcttctccaagatgaacggccacgtccccgagcccagctcagaacccatgtac
accatctcagacggcatcatccagccacactacatgtggaaagacattaaatattctccc
atggacagagagagagaagagaattgttccaaaagtgaaattaacctcaatgaggtggcc
tacagtgggaacacgagactcacaggacagagcaaggagtgccctgtggtttgtaccagt
tcccttcactgtgcttccagtatctgttcctctaactccaaactcatagactcgtcagag
gatgtgtttgattcctggggagaggcctgtgacttgtttataaaccagtggaaagatggg
caggaggatcatgttaccacccggctctga
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