Zonotrichia leucophrys gambelii (white-crowned sparrow): 135448089
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Entry
135448089 CDS
T09958
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04620
Toll-like receptor signaling pathway
zle04621
NOD-like receptor signaling pathway
zle04622
RIG-I-like receptor signaling pathway
zle05164
Influenza A
zle05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
135448089 (TRAF3)
04621 NOD-like receptor signaling pathway
135448089 (TRAF3)
04622 RIG-I-like receptor signaling pathway
135448089 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
135448089 (TRAF3)
05168 Herpes simplex virus 1 infection
135448089 (TRAF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF3_RING
zf-TRAF
zf-C3HC4
Cast
MPS2
zf-C3HC4_2
ATG16
Med28
CEP104_ZnF
FliJ
Sina_ZnF
Spc29
zf-RING_UBOX
KxDL
Tropomyosin
GAS
DUF1664
zf-RING_6
SPATA24
Crescentin
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
135448089
NCBI-ProteinID:
XP_064569641
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All DBs
Position
5:complement(5580340..5650563)
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AA seq
567 aa
AA seq
DB search
MDPSKKSEPPLSVEMVQQRANPDRSPSASIYVPEQGGYKEKFVNAVEDKYKCEKCHLILC
NPKQTECGHRFCETCMNALLRSSSPKCTACQESIVKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLSLGQLLMHLRTDCQFEELPCPRADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVPMIMLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVALLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTAGQGARNTSLLETQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggaccccagtaagaagtcagaaccccctttatctgtagaaatggtgcagcagagggcc
aatcctgaccgcagtccatcagcatccatctatgttccagagcaaggtggctacaaggag
aaatttgtgaatgccgtggaagataagtacaaatgtgaaaaatgtcacctcatcttatgc
aatcctaaacagactgaatgtggacacaggttctgtgaaacctgcatgaatgccttgctg
agatcttctagtccaaaatgtacagcgtgtcaagaaagcatagtaaaagataaggtattt
aaagataattgttgcaggagagaactacttgcccttcagatatactgcagaaatgaaaac
aagggctgtaaggaacagctgtctttgggtcaattactgatgcatttgaggactgactgt
cagtttgaagaactcccatgtcctcgtgctgattgcaaagaaaaaatactgagaaaagat
ttgccagaccatgtagagaagacctgtaaataccgggagacaacctgtaaatactgtaaa
agccaagtcccaatgattatgttgcagaaacatgaagatacagactgcccatgtgtcatg
gtttcatgtcctcataaatgtagtgttaaaacactcatgaggagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaaccaacaaattaaagcacatgaagccagctcagcagtgcagcatgttaac
ttattgaaagagtggagcaatgctctagaaaataaggtggccttgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcga
gtgatagacagtcaagcagagaaactcaaagaactggacaaagaaatccgtcccttccga
cagaactgggaggaggctgacagcatgaagagcagcgtggaatccctccagaacagagtg
actgagctggaaagtgttgataaaactgcagggcaaggagctcggaatacaagcctgctg
gagacccagctgagcaggcacgatcagatgctgagcgttcacgacatccggctggctgac
atggacctgcgcttccaggtcctggaaaccgcgagttacaacggcgtgctgatttggaaa
atccgagactataaacgtcggaagcaagaagcagtcatggggaagactctgtccctgtac
agccaacccttttatactggatactttggctacaagatgtgtgccagggtttatctgaat
ggggatggcatgggaaaggggacgcacttgtctctgttttttgtcatcatgcgtggagaa
tacgatgctttgcttccttggcccttcaaacagaaagtgactctcatgctcatggatcag
ggaccgtctcggcgccacttgggagatgctttcaagccagatccgaacagcagcagcttc
aagaagccaactggagaaatgaacattgcatctggctgcccagtgtttgtggctcaaact
gttctagagaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatcggatctaccagacccctga
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