Zonotrichia leucophrys gambelii (white-crowned sparrow): 135450095
Help
Entry
135450095 CDS
T09958
Symbol
RAPGEF4
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04081
Hormone signaling
zle04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
135450095 (RAPGEF4)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
135450095 (RAPGEF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135450095 (RAPGEF4)
Membrane trafficking [BR:
zle04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
135450095 (RAPGEF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
Motif
Other DBs
NCBI-GeneID:
135450095
NCBI-ProteinID:
XP_064573956
LinkDB
All DBs
Position
7:complement(25013422..25155188)
Genome browser
AA seq
1026 aa
AA seq
DB search
MVAAHASHSSSSGEWIACLDKRPLERSSEDVDIIFARLKEVKAFEKFHPNLLQQICLCGY
YENLEKGITLFRQGDIGTNWYAVLTGSLDVKVSDTSNHQDAVTICTLGIGTAFGESILDN
TPRHATIVTREHSELLRIEQKDFKALWEKYRQYMSGLLTPPYGVMETGSNNDRMPDKDSM
SNSALCQVSKNCNKTPLIDPHIPHHPTKTITQVPSEKILRAGKILRNTILSRAPHMIRDR
KYHLKTYRQCCVGTELVDWMMQQSPCVHLRTQAVGMWQVLLEEGVLNHVDQEHHFQDKYL
FYRFLDDEREDAPLPTEEEKKECDEELQDTMLLLSQIGPDAHMRMILRKPPGQRTVDDLE
FIYEELLHIKALSHLSTTVKRELAGVLIFESHPKAGTVLFNQGEEGTSWYIILKGSVNVV
IYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTV
RLKEHDQDVLVLEKIPAGNRISNQGNSQPQHKYIVMSGTPEKILEHFLETMRLEATLNEA
TDSVLNDFIMMHCVFMPNSQLCPALMAHYHAQPSQGTEQEKMDYALNNKRRVIRLVLQWA
ALYGDLLQEDEAAMAFLEEFYVSVSDDTRMIAALKEQLPELEKIVKQISEEPKAPQKKHK
VLLQLFNTSDDRAQKRQPIRGSDEVLFKVYCIDQTYTTIRVPVSSSVKEVIGAVADKLGS
GEGLIIVKMSSGGEKVVLKPHDVSVFTTLSVNGRLFACPRDQFDALAPLPEQEGPSTGTV
GTFELMSSKDLAHQMTIYDWELFNCVHELELIYHTFGRHNFKKTTANLDLFLRRFNEIQF
WVVTEICLCSQLSKRVQLLKKYIKIAAHCKEYKNLNSFFAIIMGLSNVAVSRLSLTWEKL
PSKFKKIYAEFESLMDPSRNHRAYRLTVAKLDPPIIPFMPLLIKDMTFTHEGNKTFTDNL
VNFEKMRMIANTVRTVKFCRSQSFNPDAALTNKNHQDVRSYVRQLNVIDNQRTLSQMSHR
LEPRRA
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccgctcacgcctcccattcctcgtcctccggcgagtggatcgcgtgcctggat
aaaaggcctttggaacgttctagtgaagatgtagatataatattcgcacgactgaaagaa
gtgaaagcttttgagaaatttcatccaaaccttctccagcagatatgtctctgtggatat
tatgaaaatctggaaaaaggaatcacattattccgtcagggtgatattgggacgaattgg
tacgctgtcctgacaggatcactggatgtgaaggtgtctgatacaagcaaccaccaggat
gctgtgacgatatgcactcttggaataggaactgcttttggagagtccattctggataac
actcctcgccatgctaccattgttaccagggaacatagtgaactccttcgaattgagcag
aaggacttcaaagcactttgggagaaatatcgacagtatatgtctggacttctcactcct
ccttatggtgttatggaaactggctccaacaatgacagaatgccagataaagacagtatg
tcaaacagtgctctttgccaagtttctaaaaactgtaataagacacctcttattgatcct
cacatcccacatcatcctactaaaaccattacacaggttccttcagaaaagatccttaga
gctggaaagattttgcgaaatacaattctgtcccgagctcctcacatgatacgagatcgt
aaataccatctgaagacttacaggcaatgctgtgtggggacagagctagttgactggatg
atgcaacaaagtccttgtgtccatttacgaacccaggctgttggcatgtggcaagtactg
ctggaagaaggtgttcttaaccatgtggaccaggaacaccactttcaggacaaatactta
ttttatcgatttttggatgatgagcgtgaagatgcccctttgccaactgaggaggagaaa
aaggagtgtgatgaagagctacaggatactatgctgcttctctctcagattgggccagat
gctcatatgaggatgattctcaggaaaccccctggccagagaactgtagatgacttagaa
tttatatatgaagaacttctccacattaaggccttatctcacctttctaccacggtaaaa
cgggaattagcaggtgtcctcatttttgagtcacatcccaaagcaggaacagtcttattt
aatcagggagaagaaggtacttcttggtacattatcctaaagggatcagtaaacgtagtc
atttatggcaagggtgtggtatgtactctacacgaaggagatgattttggcaagttagca
cttgtgaatgatgctcccagagcagcatccattgttctgcgggaagacaactgccacttc
ctgagagtagataaggaggacttcaacaggatccttagggatgtggaagcaaatacagta
agactcaaagaacatgaccaagatgtcttggtgttggagaagatcccagcaggaaacaga
atttctaatcaaggaaattcacagccgcagcacaagtatattgtgatgtcaggaacccca
gagaaaattttagagcactttctagaaactatgcgccttgaagcaactttaaatgaagca
acagattctgttttaaatgattttattatgatgcactgtgtttttatgccaaatagtcag
ctctgcccagccttgatggcacactatcatgcccagccttctcagggtacagagcaggag
aagatggattatgccctcaacaacaaacggcgagtcattcggctggttctgcagtgggct
gctttatatggagatttactgcaagaagatgaagcagcaatggcctttttggaggaattt
tatgtatctgtatcagatgataccagaatgattgcagcactaaaggagcaacttccagag
ctagagaaaattgtaaagcaaatttctgaagaacctaaagcaccacaaaagaagcacaaa
gttcttctgcagctgttcaacacaagtgatgacagagcacagaaacgccagcctatcagg
ggcagtgatgaggttctgttcaaggtgtactgcatagaccaaacctacaccactatccgt
gtgccagtgtcgtcttctgtgaaggaagtgatcggtgcagtagcagacaagctgggctct
ggagaaggcctcatcatagtgaagatgagttcaggaggagaaaaggttgtgctcaagcct
cacgatgtttctgtgttcaccactctgagcgttaatggccggctgtttgcctgccctcgg
gatcagttcgatgctctggcaccattgccagaacaagaaggaccatctactggtacagta
ggaacatttgaactgatgagttccaaagacttagcacatcagatgacaatttatgactgg
gagctcttcaactgtgtgcatgagctggaattgatttatcacacttttggaaggcacaat
tttaaaaagaccacggcaaatctggacttgtttttaagaagattcaatgaaattcagttc
tgggtggtcaccgagatttgtctttgctctcaactcagcaagcgtgttcagctgttaaag
aaatacattaagatagcagcccactgtaaggaatacaaaaatctgaattcctttttcgct
attattatgggactgagcaatgttgctgtgagccgtctgtcattaacgtgggagaaactc
ccaagcaagttcaagaagatctatgcagagtttgaaagcttaatggatccatcaagaaac
catagggcctatagactgactgtagctaaattggaccctccaataattcctttcatgcca
ctgcttataaaagacatgacgtttactcatgagggaaacaagacattcactgacaatcta
gtaaacttcgagaaaatgcgcatgattgccaacactgtcaggacagtgaaattctgccga
agccaatctttcaatcctgatgcagccctaactaataaaaaccatcaggatgttcggagc
tacgtgcggcaattaaatgtgattgacaaccagagaactttatcacagatgtctcaccga
ctggaaccgcgccgagcataa
DBGET
integrated database retrieval system
