Zonotrichia leucophrys gambelii (white-crowned sparrow): 135453449
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Entry
135453449 CDS
T09958
Symbol
PLXND1
Name
(RefSeq) plexin-D1 isoform X1
KO
K06822
plexin D
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
135453449 (PLXND1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
Sema
PSI
TIG_plexin
PSI_PlexinA-B
TIG_2
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
135453449
NCBI-ProteinID:
XP_064580583
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All DBs
Position
12:288150..355055
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AA seq
1947 aa
AA seq
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MAPAPLPVPAPAAAGAEPRPPALLPLLLPLLPLLLPGRAAGLEVQRKFLSPTLTNNFALD
GPGSRVYLAAVNRLFQLSGGELTLEAEAAVGPVLDSPLCHAPQLPQASCEHPRVLTNNYN
KILQPDPEQGVLVVCGSIYQGLCQLRSMANISAVAVRFPPGGSDSVAVFPSMLNVAANHP
NASTVGLVLRRGGGGGARLLVAATYTGFGSPFFPRNNSLEDHRFENTPEIAIRALNARGD
LAKLFTFDINPSDDNILKIKAGDKARHKLSFVRAFLQHGATPPARRPYAYLALNSEANAG
DKESPAHSLLARICLGEPAEATLNGSGETKKLTESYIQLGLRCGGAADAFTRLVSVFPAR
AAWRSPAAPHGPAPAPPPPEELLFGVFERAGAGGGRGRPQSALCVFRFAEIEETIRAARN
SCLVSPAAGMVTVLDSVVQGTGPACEKRNIQLQPEQLDCGAAHLQHPLAILNPVTATPIF
TYSGLTAVAVASVHNYTVVFLGTASGGLLKINLDSTMKVISRRSISVAYGEPVHPIMQFD
PSDSTYLYLMTSYQMTRVKVAACSQYSTCTECLAAADAYCGWCTMETRCSLQHECTDFTG
ANFWVSVSEGVQQCPSMTILEPEISIDKENPALIIQINGTIPNLNGTDISCDYGNNIRTV
ARVAGDYVNQFIYCSLLPREKYPAFPDDQDHVVVETSLRVNNKNIIRANFTIYDCKRIGN
IYPTRACTSCLSARWKCHWCPSAYSCVSNRSQCEDALRMEQKKIDCPQIVPAPLEPMPTG
VSQNIMISLANATFAKETALECHFGADGTFEARWVNSSAVECVHVLLHTSEKSHRFPVNL
QLKDKPDRFIDSPEMMTVEVYNCATGSADCSQCLGREDLGHRCLWSESSSSCRLQTEPPQ
VAEACPPPEIRKIEPLRGPLEGGTLLTIRGRNLGRRFSDIAGAVRVGAVRCAPLPHRYVV
SETVVCQTGEAAEAFSDVVTVNVSREGRSRERYSYVLPVVQSIAPLNGPKAGGTRVTIRG
SRLDVGSELRVLINSSKQCTDLSRTDSSITCTMPAAELTAAVPVCVQFENKSCASHNITF
KYEKNPVISDINPKKSQISGGRIITLEGRGFGLVQNVSMAVRGIGREHTRCKVHTDTAIT
CPSPAASNVTAGTKPAPVDFYLNGRLYADERSALDEEMYPEEALHVSKFSLGYYADPQFS
TAKKEKWIKHHPGEPLTLVIHKEPDSLGLESNEYQVKIGLISCEIQIVSDKVIHCSINES
LSSSERQLPVTIQVGKFNYTIAMLHLGGGETAIIVSIVICSILLVLSVVALFVFCTKSRR
AERYWQKTLLQMEEMESQIREEIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTF
FPKCSSLYEECYILPSQQLSSQVGSQVQETHPLLVGEWKVPENCRPNMEEGISLFSTLLN
NKHFLIVFVHALEQQKDFAVRDRCNLASLLTIALHGKLEYYTSIMKDLLVDLIDASASKN
PKLMLRRTESVVEKMLTNWMSICMYSYLRETVGEPFFLLICAIKQQINKGSIDAITGKAR
YTLNEEWLLRENIEAKPRNLNVSFQGCGMDSLSVRAMDTDTLSQVKEKILEAFCKNVPYS
QWPRVEDVDLEWFATSTDSYILRDLDDTSVVEDGRKKLNTLAHYKIPEGASLAMSLTDKK
DTTLSRVKDLDTEKYFHLVLPTDESVEHKKSHRQSHRKKVLPEIYLTRLLSTKGTLQKFL
DDLFKAILSIRDDKPPVAVKYFFDFLEEQAEKRGITDPDTLHIWKTNSLPLRFWVNILKN
PQFVFDIDKTDHIDACLSVIAQAFIDACSLSDLQLGKDSPTNKLLYAKEIPEYRKIVQRY
YKQIHDMPPLSEQEMNAHLAEESRKYRNEFNTNVAMAEIYKYAKRYRSQIVAALDANPTT
KRTQLQHKFEQVIALMEDNIYESCSEA
NT seq
5844 nt
NT seq
+upstream
nt +downstream
nt
atggctccggctccgctcccggtcccggccccggcggcggcgggcgctgagccgcggccc
cccgcgctgctgccgctgctgctgccgctgctgccgctgctactgcccggccgagccgcc
ggcctggaggtgcagcgcaagttcctctcgcccaccctcaccaacaactttgcgctggac
ggccccggctcccgcgtttacctggcggccgtcaaccggctgttccagctgtcggggggc
gagctgacactggaggcggaggcggcggtggggccggtgctggacagcccgctgtgccac
gcaccgcagctgccgcaggcctcctgcgagcaccccagggtgctcaccaacaactacaac
aagatcctgcagcccgacccggagcagggcgtccttgtcgtctgcggctccatctaccag
ggcctctgccagctgcgcagcatggcaaacatctcggcagtggccgtgcgcttcccgccg
ggcggcagcgactcggtcgcggtcttcccaagcatgctgaacgtcgcggccaaccacccc
aacgcctccaccgtggggctggtgctgcgccgcggcggcggcggcggggcgcggctgctg
gtggccgccacctacactggcttcggcagccccttcttcccccgcaacaacagcctggag
gaccaccgcttcgagaacacgcccgagatcgctatccgtgccctcaacgcccgcggcgac
ctggccaagctcttcaccttcgacatcaacccctccgacgacaacatcctcaagatcaag
gcgggcgacaaggcgcggcacaagctcagcttcgtccgcgccttcttgcagcacggggcc
acgccgcccgcccgccgcccgtacgcctacctggcgctcaacagtgaggccaacgcgggc
gacaaggagagcccggcgcacagcctgctggcccgcatctgcctgggcgagccggccgag
gccaccctcaacggcagcggcgagaccaagaagctgaccgagtcctacatccagctgggg
ctgcgctgcggcggcgccgccgacgccttcacccgcctcgtctccgtcttcccggcgcgg
gcagcttggcgcagccccgccgctcctcacggcccggccccggccccgccgccccccgag
gagctgctcttcggcgtcttcgagcgggccggggccggcggcggccgggggcggccgcag
tccgcgctctgcgtcttccgcttcgccgagatcgaggagacgatccgggccgcccgcaac
tcctgcctcgtcagcccggccgccggcatggttaccgtgctggacagcgtggtgcagggc
accggcccggcctgcgagaagagaaatatacagctgcagccggagcagctggactgcgga
gccgcgcacctgcagcacccgctggccatcctgaacccggtcactgccacccccatcttc
acctacagcggcctgaccgccgtggcagtggccagtgtccacaactacacggtcgtgttc
ctgggcacggccagcggaggactcctcaagataaacctggacagcacgatgaaggttatt
agcaggagatccatttcggtggcttatggagagcctgtccaccccatcatgcaatttgac
ccttctgattccacttacctctacctgatgacctcttaccagatgacccgggtgaaggtg
gctgcctgcagccagtactcgacgtgcacggagtgcctggccgccgccgacgcctactgc
gggtggtgcaccatggagaccaggtgttctctgcagcatgagtgcaccgacttcacaggg
gccaacttctgggtgagcgtgagtgaaggagtgcagcagtgcccttccatgaccatcctg
gagcccgagatcagcattgacaaagagaacccggccctgataatacaaataaatggaact
atcccgaacttgaatggaacagatatttcatgtgactatggaaacaacatccgcacggta
gccagagtcgctggggattatgtgaaccaatttatttattgcagtttgcttccacgcgag
aaatatccagcatttcctgatgaccaagaccacgtggtcgttgaaacttctctccgggtc
aacaacaaaaacataatccgggccaatttcaccatctatgattgcaaaaggattgggaac
atttaccccacaagagcgtgcaccagctgcctctcagccaggtggaagtgtcactggtgc
ccctcggcctacagctgcgtctccaaccgctcgcagtgtgaggatgctctgcggatggag
cagaagaaaattgactgtcctcagatagtacctgcccctttggagccaatgcccacgggt
gtatctcagaacatcatgatctcactggccaatgcaactttcgctaaggagacagccctg
gagtgccattttggggcagacgggacgtttgaggcgcgctgggtgaactcctctgccgtg
gagtgtgtgcacgtgctgctccacacatcagagaaaagccatcgcttcccagtgaacctc
cagctgaaggacaaaccagacagatttatcgacagtccagagatgatgacagtggaggtg
tacaactgcgcgaccggcagtgccgactgctcccagtgcctgggcagggaggacctgggc
caccgctgcctctggagcgagagcagctccagctgcaggctgcagaccgagcccccacag
gtcgctgaggcctgcccgcctccggagatccgcaagatcgagccgctgcgggggccgctg
gaggggggcacgctgctgaccatccgcgggaggaacctgggccggcgcttcagcgacatc
gcgggcgccgtgcgcgtgggcgccgtgcgctgcgccccactgccccacagatacgtcgtc
tctgagacagtggtgtgccagaccggagaggctgcggaggcgttctcagacgtggtcacg
gtcaacgtgagccgggaggggaggtccagggagcgctactcctacgtgcttcccgtggtg
cagtccatagctcctctgaatggcccgaaggcaggaggaacaagagtgaccatcagaggc
agcaggctggatgtcggctcagagctccgtgtcctcatcaactcctccaagcagtgcacg
gacctcagccgcacggacagcagcatcacctgcaccatgcccgccgcggagctcaccgcg
gccgtgccagtctgcgtgcagttcgagaacaagtcctgtgccagccacaacatcactttc
aagtatgagaagaacccggttatatcggacatcaaccccaaaaagagccagatcagcggg
ggcaggatcatcacgctggaaggcagaggctttgggctggtgcagaacgtgtccatggct
gtgcgtggcatcggcagggagcacacgcgctgcaaggtgcacacggacacggccatcacc
tgcccctctccagctgcctccaacgtcactgcggggaccaagccagcccctgtggatttc
tacctcaacgggcgcctctacgctgatgagcgctcggccctggatgaggagatgtacccc
gaggaggccctgcacgtcagcaaattcagcctgggctactacgctgacccccagttctcc
acagccaagaaggagaagtggatcaagcaccatcctggcgagcccttaactctggtcata
cataaagaacctgacagcctgggcctggagagcaatgaataccaggtgaaaatcggcctg
atctcgtgtgagatccagattgtttcagacaaagtcatccactgctccatcaacgagtcg
ctgagctcctcggagaggcagctgccggtgacgatccaagtcggaaagttcaactacaca
attgccatgcttcaccttgggggaggagaaaccgccatcattgtctccatcgttatctgc
agcatcctgctggtcctctctgttgtagctctctttgtgttctgcacaaagagccgcaga
gctgagcgctactggcagaaaaccctgctccagatggaggagatggagtcgcagatccgc
gaggaaatccgcaaaggttttgcagagctgcagacagacatgacagacctgacgaaggag
ctaaaccgcagccagggaatccccttcctggagtacaagcactttgtcaccaggacgttc
ttccccaaatgttcctctctctacgaggagtgctacatcctgccatcccagcagctcagc
tcgcaggtgggctcccaggtgcaggaaacacatccactcctggtgggggagtggaaggtt
cctgagaactgcagacccaacatggaagaaggaatttctctgttctccaccttactcaac
aacaagcactttctcatcgtatttgtccatgctctcgagcaacagaaggactttgctgtc
agagacaggtgtaacctggcctccctgcttactattgcactgcatgggaaactggagtat
tacaccagcatcatgaaggacctcttggtggatctaatagatgcttcagcttccaaaaac
cccaagcttatgctgaggaggacagaatctgtggtggagaagatgctcaccaactggatg
tccatctgcatgtacagctatctcagagagacagttggagagcccttcttcctgctgatc
tgtgccatcaaacagcagattaacaagggttccatcgatgccattacagggaaggccagg
tacaccctcaacgaggagtggctgctgagggagaacatagaggcaaagccgaggaacctc
aatgtctccttccaaggctgtgggatggactccctgagtgtcagagccatggacacggac
acactgagtcaagtgaaagagaaaattctggaggccttctgcaagaacgtcccctactcc
cagtggccaagggtggaagacgttgacctcgagtggtttgccaccagcaccgacagctac
atcctgcgggacctcgatgacacctcggtggtggaggacggcaggaagaaactcaacacg
ctggcacattacaagatccctgaaggggcatccctggccatgagtttgacggacaagaag
gacaccacgctgagcagagtgaaggatttggacactgaaaagtacttccacttggttctc
ccaactgacgagtcagtggaacataagaagtcccacagacagagccataggaagaaggtt
cttccagagatctacctgacacggctgctctccaccaaggggacactccagaagttcctg
gatgacttgttcaaagccattctcagtatccgagacgataaaccacccgtggctgtgaag
tatttctttgacttcctagaggaacaggcagagaagagaggcatcacagaccctgacact
ctgcacatctggaagaccaacagcctaccactgaggttttgggtcaacatcctgaaaaac
ccccagtttgtgttcgacattgacaagacagaccacatcgacgcctgtctgtctgtgatc
gcccaggccttcatcgacgcctgctcgctctcggacctgcagctgggcaaggactccccg
accaacaaattgctgtatgccaaggagatccccgagtaccggaagatagtgcagagatac
tacaagcaaatccacgacatgccccctctgagtgagcaggagatgaacgcccacctcgcc
gaagagtcgcggaaataccgaaatgagttcaacaccaatgtcgccatggctgagatctac
aaatacgccaagagataccgctcccagatcgtggccgccctggacgcaaaccccacgaca
aagcgcacccagctccagcacaaatttgagcaagtgattgctctcatggaggacaacatc
tatgagtcctgcagtgaagcctag
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