KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135454871
Entry
135454871         CDS       T09958                                 
Symbol
TRAF2
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04010  MAPK signaling pathway
zle04137  Mitophagy - animal
zle04141  Protein processing in endoplasmic reticulum
zle04210  Apoptosis
zle04217  Necroptosis
zle04621  NOD-like receptor signaling pathway
zle04622  RIG-I-like receptor signaling pathway
zle04920  Adipocytokine signaling pathway
zle05132  Salmonella infection
zle05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:zle00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    135454871 (TRAF2)
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    135454871 (TRAF2)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    135454871 (TRAF2)
  09143 Cell growth and death
   04210 Apoptosis
    135454871 (TRAF2)
   04217 Necroptosis
    135454871 (TRAF2)
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    135454871 (TRAF2)
   04622 RIG-I-like receptor signaling pathway
    135454871 (TRAF2)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    135454871 (TRAF2)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    135454871 (TRAF2)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    135454871 (TRAF2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zle03019]
    135454871 (TRAF2)
   04121 Ubiquitin system [BR:zle04121]
    135454871 (TRAF2)
Enzymes [BR:zle01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     135454871 (TRAF2)
Messenger RNA biogenesis [BR:zle03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     135454871 (TRAF2)
Ubiquitin system [BR:zle04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    135454871 (TRAF2)
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_2 zf-C3HC4_4 Sina_ZnF zf-C3HC4_5 zf_C2HC_14 zf-RING_6 zf-TRAF_2 zf-RING_10 zf-RING_UBOX MATH
Other DBs
NCBI-GeneID: 135454871
NCBI-ProteinID: XP_064583520
LinkDB
Position
17:11199796..11220966
AA seq 472 aa
MAAANSSPPGSLDLNQPGFAKEILGTKLEVKYLCSDCKNILRRPFQAQCGHRYCSYCLKR
IISAGPQKCASCIQEGIYEEGISILETSSAFPDNAARREVESLPAVCINSGCTWKGTIKE
YEAHDEVCPEFPLTCEGCGKKIPREKFRDHVKTCGRSKVPCRFEAVGCTEMVENEMLPEH
ERKCLAEHLYMLLSSVLSLKTGAGDLKPLPVPSSSQNSSPLLGANSLCSESELSRSLELL
GRCEALERKTATFENIVCVLNREVERVSLTAEAYSRQHRLDQEKIETLSNKVRQLERSIG
LKDLAMAEMEEKIRNMEASTYDGVFIWKITEFARKRQEAITGRSPAIFSPAFYTSKYGYK
MCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHIIDAFRP
DVTSSSFQRPVTEMNIASGCPLFCPVSVMEAKNSYVRDDAIFIKAIVDLTGL
NT seq 1419 nt   +upstreamnt  +downstreamnt
atggcagcagcaaactcttctccacctggttctctggatctaaaccagcctgggtttgca
aaggagatcctgggaactaaactggaggtcaaatacctgtgctccgattgcaagaacatc
ctgaggcggccgttccaggcgcagtgcggccatcgctactgctcctactgcctgaagaga
atcatcagtgctggacctcagaagtgtgccagctgtatccaggaaggaatatacgaagaa
ggaatttctattttggaaacaagctcggctttcccagacaatgcagcgcggcgggaggtg
gagagtctgcctgctgtctgcatcaacagcggctgcacctggaagggaaccatcaaagag
tacgaggctcatgatgaagtctgccctgaattcccgctgacttgtgaaggctgtgggaag
aagattcccagggagaagtttcgggaccatgtgaagacgtgtggcagatccaaagtaccg
tgccggttcgaggctgtgggctgtactgagatggtggaaaatgaaatgctcccagaacac
gaaaggaagtgtttggcagagcatctctacatgcttctgagctctgtgctcagcctcaag
actggtgctggggacctgaagccccttcctgtcccttcctcatcacaaaacagttcccca
cttctgggagcaaactcactgtgctcggagtcggagctctcccggtccctagagctcttg
ggaaggtgtgaggcccttgagaggaaaacagctacctttgagaacattgtctgtgtgctt
aaccgggaggtggagagagtgtccctgacagctgaggcctacagtcgccagcaccggctg
gaccaggagaaaatcgaaacgctgagcaacaaggtccggcagctggagaggagcattggg
cttaaagacctggccatggctgagatggaggagaagatccgcaacatggaggcttccacc
tacgatggggttttcatctggaagataacggagtttgcgcggaagcgtcaggaggcgata
acgggccgctcgcctgccatcttctctccagctttctacaccagcaagtatggctacaag
atgtgtctgcgcgtgtacctgaatggggacggcaccggccgtggcacccacctgtccctg
ttttttgtggtgatgaagggacctaacgatgcgctgctgcggtggccctttaaccagaag
gtcaccctgatgcttctggaccagaataaccgggagcacatcatcgatgccttccgcccc
gacgtgacgtcctcgtccttccagcgccccgtcacggagatgaacatcgccagcggctgc
cccctcttctgccccgtgtcagtcatggaagccaagaactcctacgtgcgtgatgatgcc
atctttattaaagccatcgttgatctcacgggcctctaa

DBGET integrated database retrieval system