Zonotrichia leucophrys gambelii (white-crowned sparrow): 135454871
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Entry
135454871 CDS
T09958
Symbol
TRAF2
Name
(RefSeq) TNF receptor-associated factor 2 isoform X1
KO
K03173
TNF receptor-associated factor 2 [EC:
2.3.2.27
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04010
MAPK signaling pathway
zle04137
Mitophagy - animal
zle04141
Protein processing in endoplasmic reticulum
zle04210
Apoptosis
zle04217
Necroptosis
zle04621
NOD-like receptor signaling pathway
zle04622
RIG-I-like receptor signaling pathway
zle04920
Adipocytokine signaling pathway
zle05132
Salmonella infection
zle05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135454871 (TRAF2)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135454871 (TRAF2)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
135454871 (TRAF2)
09143 Cell growth and death
04210 Apoptosis
135454871 (TRAF2)
04217 Necroptosis
135454871 (TRAF2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
135454871 (TRAF2)
04622 RIG-I-like receptor signaling pathway
135454871 (TRAF2)
09152 Endocrine system
04920 Adipocytokine signaling pathway
135454871 (TRAF2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135454871 (TRAF2)
09171 Infectious disease: bacterial
05132 Salmonella infection
135454871 (TRAF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zle03019
]
135454871 (TRAF2)
04121 Ubiquitin system [BR:
zle04121
]
135454871 (TRAF2)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135454871 (TRAF2)
Messenger RNA biogenesis [BR:
zle03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
135454871 (TRAF2)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
135454871 (TRAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
zf-C3HC4
TRAF3_RING
zf-C3HC4_2
zf-C3HC4_4
Sina_ZnF
zf-C3HC4_5
zf_C2HC_14
zf-RING_6
zf-TRAF_2
zf-RING_10
zf-RING_UBOX
MATH
Motif
Other DBs
NCBI-GeneID:
135454871
NCBI-ProteinID:
XP_064583520
LinkDB
All DBs
Position
17:11199796..11220966
Genome browser
AA seq
472 aa
AA seq
DB search
MAAANSSPPGSLDLNQPGFAKEILGTKLEVKYLCSDCKNILRRPFQAQCGHRYCSYCLKR
IISAGPQKCASCIQEGIYEEGISILETSSAFPDNAARREVESLPAVCINSGCTWKGTIKE
YEAHDEVCPEFPLTCEGCGKKIPREKFRDHVKTCGRSKVPCRFEAVGCTEMVENEMLPEH
ERKCLAEHLYMLLSSVLSLKTGAGDLKPLPVPSSSQNSSPLLGANSLCSESELSRSLELL
GRCEALERKTATFENIVCVLNREVERVSLTAEAYSRQHRLDQEKIETLSNKVRQLERSIG
LKDLAMAEMEEKIRNMEASTYDGVFIWKITEFARKRQEAITGRSPAIFSPAFYTSKYGYK
MCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQNNREHIIDAFRP
DVTSSSFQRPVTEMNIASGCPLFCPVSVMEAKNSYVRDDAIFIKAIVDLTGL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcaaactcttctccacctggttctctggatctaaaccagcctgggtttgca
aaggagatcctgggaactaaactggaggtcaaatacctgtgctccgattgcaagaacatc
ctgaggcggccgttccaggcgcagtgcggccatcgctactgctcctactgcctgaagaga
atcatcagtgctggacctcagaagtgtgccagctgtatccaggaaggaatatacgaagaa
ggaatttctattttggaaacaagctcggctttcccagacaatgcagcgcggcgggaggtg
gagagtctgcctgctgtctgcatcaacagcggctgcacctggaagggaaccatcaaagag
tacgaggctcatgatgaagtctgccctgaattcccgctgacttgtgaaggctgtgggaag
aagattcccagggagaagtttcgggaccatgtgaagacgtgtggcagatccaaagtaccg
tgccggttcgaggctgtgggctgtactgagatggtggaaaatgaaatgctcccagaacac
gaaaggaagtgtttggcagagcatctctacatgcttctgagctctgtgctcagcctcaag
actggtgctggggacctgaagccccttcctgtcccttcctcatcacaaaacagttcccca
cttctgggagcaaactcactgtgctcggagtcggagctctcccggtccctagagctcttg
ggaaggtgtgaggcccttgagaggaaaacagctacctttgagaacattgtctgtgtgctt
aaccgggaggtggagagagtgtccctgacagctgaggcctacagtcgccagcaccggctg
gaccaggagaaaatcgaaacgctgagcaacaaggtccggcagctggagaggagcattggg
cttaaagacctggccatggctgagatggaggagaagatccgcaacatggaggcttccacc
tacgatggggttttcatctggaagataacggagtttgcgcggaagcgtcaggaggcgata
acgggccgctcgcctgccatcttctctccagctttctacaccagcaagtatggctacaag
atgtgtctgcgcgtgtacctgaatggggacggcaccggccgtggcacccacctgtccctg
ttttttgtggtgatgaagggacctaacgatgcgctgctgcggtggccctttaaccagaag
gtcaccctgatgcttctggaccagaataaccgggagcacatcatcgatgccttccgcccc
gacgtgacgtcctcgtccttccagcgccccgtcacggagatgaacatcgccagcggctgc
cccctcttctgccccgtgtcagtcatggaagccaagaactcctacgtgcgtgatgatgcc
atctttattaaagccatcgttgatctcacgggcctctaa
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