Zonotrichia leucophrys gambelii (white-crowned sparrow): 135455916
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Entry
135455916 CDS
T09958
Symbol
TRIM37
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37 isoform X1
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135455916 (TRIM37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zle04121
]
135455916 (TRIM37)
Enzymes [BR:
zle01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135455916 (TRIM37)
Ubiquitin system [BR:
zle04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
135455916 (TRIM37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
zf-C3HC4_2
HlyD_2
BORCS6
MRFAP1
LAMB1
PIN_8
Motif
Other DBs
NCBI-GeneID:
135455916
NCBI-ProteinID:
XP_064585527
LinkDB
All DBs
Position
19:complement(8720982..8746814)
Genome browser
AA seq
984 aa
AA seq
DB search
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
RELVNCRWAEEVTQQLDTLQLCSLTKHEENEKDKCENHHEKLSVFCWTCKKCICHQCALW
GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVERNVEAVRSAKDERVR
EIRNAVEMMIARLDTQLKNKLITLMGQKTSLTQETELLETLLQEVEHQLRSCSKSELISK
SSEILMMFQQVHRKPMASFVTTPVPPDFTSELVPAYDSTTFVLENFSTLRQRADPVYSPP
LQVSGLCWRLKVYPDGNGVVRGYYLSVFLELSAGLPETSKYEYRVEMVHQSTNDPTKNII
REFASDFEVGECWGYNRFFRLDLLANEGYLNRQNDTVILRFQVRSPTFFQKCRDQHWYIA
QLEAAQTSYIQQINNLKERLAIELSRTQKSRGVSPPDTHLSPQNDEGSETRAKKPGQSIE
ALLENFTAPGLARENKEEEEEKTQQEDFNHELSDGDLDIDLAGEDEVNHLDGSSSSASST
ATSNTEENDIDEETMSGENDVEYGGTMELEDGDLMEDAAAAAATPGASGSSPSFGRASRR
GASALGSAASSSLLDIDPLILIHLLDLKDRNGMENLWGLQPRPPASLLQNRASSYSLKER
EQRRHQAMWRVPPDLKMLKRLKTQMAEVRSKMSDVKNQLSEVRSSNAASGEGQPSFFSME
QGALAACGTDGCSKLQEIGMELLTKSSVTSCYIRSSASKKSSSAKPLRSGAAGSLSLRRA
MDSGDGNLRLKGDSSHPSEGLGSSKLGVRPLRAPEALPKEEPPCEGSDSELGAAAAPAGL
PAGDKSRKAAALGSSSKGCRAEGAQPGGLEGSSEPGELQSSEGAAAEEGAGLCQKHVLHL
LPGMSSDSDIECDTENEEQEDATSPSEVFNQAFSAQPSSEGHSSVVADGDQASSEDLSFV
PADDSTRPSPAGEFSVHPAFVWSR
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcagagcgtggagagcattgccgaggtgttccgatgttttatttgtatggag
aagctgcgggatgcccgcctgtgcccccactgctccaagctctgctgtttcagctgtatc
cggcgttggctgactgaacaaagagctcagtgccctcattgtagagcccccctgcagctc
cgggagctcgtcaactgtcgctgggcagaggaggtgacccagcagctggacaccctgcag
ctctgcagcctcaccaagcacgaggagaatgagaaggacaagtgtgaaaaccatcatgag
aagctcagtgttttctgctggacctgcaagaagtgtatctgccaccagtgtgcactctgg
ggaggaatgcacgggggacacacttttaaaccactggcagaaatctacgagcagcacgtc
accaaagtgaatgaagaagtggcaaagctgaggagaagactcatggaattgatcagtttg
gtgcaggaagtggagcggaacgtggaggccgtgcgcagcgccaaggacgagcgcgtgcgc
gagatccgcaacgccgtggagatgatgatcgcccgcctggacacccagctcaagaacaag
ctcatcaccctcatgggtcagaagacatcacttactcaagaaactgaacttctggaaacc
ctgctacaagaagtagaacatcagctgcggtcctgcagcaagagtgagctgatatccaaa
agctccgagatcctgatgatgttccagcaggtccatcggaagcccatggcctcctttgtc
accactcctgtccccccagacttcacaagtgaattggttccagcctatgactcaacaaca
tttgtcttggaaaacttcagcaccctgcggcagcgcgcggatcccgtgtacagccctccc
ctgcaggtgtcaggactgtgctggagattaaaggtttacccggatggaaatggagtagtt
cgaggctactacctgtcagtgttcctggagctgtctgctgggctgccagagacatccaag
tatgaataccgtgtagagatggttcaccagtccaccaacgaccccaccaaaaacatcatc
cgggaattcgcctctgatttcgaggttggcgagtgctggggctacaatcgcttcttccgc
ctggacctgctggccaacgagggctacctgaaccgccagaacgacaccgtcatcctcagg
ttccaagtgcgctcaccaaccttcttccagaagtgccgcgatcagcactggtacattgct
cagctggaagcagctcagacgagttacatccagcaaataaataacctgaaagagaggctc
gcgattgagctgtcccggacgcagaaatcccgaggggtttcccctccagacactcacctc
agcccccagaacgatgagggctcagagacaagagcaaagaaacctggacaaagcattgaa
gcactgcttgagaatttcactgctccaggattggcacgggagaacaaggaggaggaggaa
gagaagactcagcaggaggactttaatcacgagctctcagatggtgacctggatatagac
cttgcaggagaagatgaggtgaaccaccttgatggcagcagctcctcagcgagttcaaca
gcaaccagtaacactgaggaaaatgacattgatgaagaaacgatgtctggagagaacgat
gtggagtacggcggtaccatggagctggaggatggagatctcatggaggatgcagcagca
gctgctgctactcctggagcatcaggttccagccccagcttcggcagagcctcgcggcgc
ggcgccagcgccctgggctccgctgccagcagcagcctgctggacatcgatcccctcatc
ctcatccacctcttggacctcaaggacaggaatggcatggaaaacctctggggccttcag
ccacgtcctcctgcctcccttctgcagaacagagcctcctcctactccctgaaggagcgg
gagcagcgcaggcaccaggccatgtggagggtgcccccagacctgaagatgctgaaaaga
ctcaaaacccagatggcagaagttcgcagcaagatgtctgatgtgaagaaccagctgtct
gaagtgaggagcagcaatgctgcctcaggggagggacagcccagcttcttctccatggag
cagggtgccctggctgcctgtggcactgacggctgcagcaagctgcaggagattggcatg
gagctgctgaccaagtcctcagtcaccagctgctacataaggagctctgccagcaagaaa
agttcctcagccaagccccttcgctcgggagctgccgggagcctgtccctgaggagagcc
atggacagcggggacgggaacctgcgcctcaagggggacagcagccaccccagtgagggc
ctgggcagctccaagctgggtgtgcggcccctccgcgcccccgaggcgctgcccaaggag
gagccgccctgcgagggctcggactcggagctgggagctgctgctgcccccgctggcctg
cctgccggggacaagagcaggaaagctgctgctctgggctccagctccaaggggtgtcgg
gcagagggagcccagcctgggggcctggagggcagctccgagcccggggagctgcagagc
tcggagggagcagcggcagaggaaggagctgggctgtgtcagaagcacgtcctgcacctg
ctgcccgggatgagcagtgacagtgacatcgagtgtgacacggagaacgaggagcaggaa
gatgccacctccccctccgaggtgttcaaccaggccttctctgcccagccctccagtgaa
ggacactcctcggtggtagcagatggggaccaggccagttctgaggatctcagctttgtc
cctgcagatgacagcaccaggccttctccagcaggagagttctcagtgcaccctgccttt
gtctggagcaggtag
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