Zonotrichia leucophrys gambelii (white-crowned sparrow): 135456845
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Entry
135456845 CDS
T09958
Symbol
NKX3-1
Name
(RefSeq) homeobox protein Nkx-3.1
KO
K09348
homeobox protein Nkx-3.1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135456845 (NKX3-1)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
135456845 (NKX3-1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
WbqC
DUF7645
Motif
Other DBs
NCBI-GeneID:
135456845
NCBI-ProteinID:
XP_064587035
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Position
22:5493734..5499206
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AA seq
213 aa
AA seq
DB search
MSSARTPPAMSGSPGPGPRPRPGPARPRSSFLIQDILWEPEPAPGSGSEERGAASEGGSA
GSPATGAPPEGPQPGGAPGTARGAEPEAPPEPFLPERGPSAAPPPPRPGKRSRAAFSHSQ
VIELERKFSHQKYLSAPERAHLARHLQLTETQVKIWFQNRRYKTKRKQVVAGMSRLDSRQ
EAPEFPGMSLLALRGAWPYLPCLYYVNSWSPSW
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgagctcggcccgcacccccccggccatgagcggctcccccgggcccggcccgcggccc
cggcccggccccgcacggccccgcagctccttcctcatccaggacatcctgtgggagccc
gagccagccccgggcagcgggagtgaggagcggggagcggccagcgaggggggcagcgcg
ggcagcccggccacgggagcgccccccgagggtccccagcccggcggagccccggggaca
gcgcggggagcagagccagaggcgccgccggagccgttcctgcccgagcgcggcccctcc
gcggccccgccgccccccaggccgggcaaacgctcccgagccgccttctcgcacagccag
gtgatcgagctggagcgcaaattcagccaccagaaatacctgtcggcccccgagagagcg
cacctggcccggcacctgcagctcaccgagacccaggtgaagatctggttccagaacagg
cggtacaagaccaagaggaaacaggtggtggccgggatgagccgcttggactcgcgtcag
gaagcgccggaattcccgggaatgtcgctgctggcgctcaggggcgcctggccctacctg
ccctgcctctactacgtcaactcctggagcccctcctggtag
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