Zonotrichia leucophrys gambelii (white-crowned sparrow): 135458067
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Entry
135458067 CDS
T09958
Symbol
PKP1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
zle04812
]
135458067 (PKP1)
Cytoskeleton proteins [BR:
zle04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
135458067 (PKP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ZER1-like_2nd
HEAT
HEAT_2
V-ATPase_H_C
ARM_LRRK2
ARMC9_ARM
LTN1_E3_ligase_6th
Mo25
TOR1L1_N
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
135458067
NCBI-ProteinID:
XP_064589051
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Position
26:complement(6761717..6812483)
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AA seq
733 aa
AA seq
DB search
MLHSPLKTALAYECFQDQASSTLALPSDHKLKTKGTGKQRVQEQVMMTVKRQKQKSSVSS
SVGHSNRGSMYDGLADGYGYGTSRGSYYTKTQTGNSNWGYPLYNGTLKRDVENRRYSSYS
QMEGWASRAHSKALCSPRAGSDYCFVQNIKSSRSEPDLYCEPPRGTLRKAHGGGRAEHKA
TLNRQSIYSSCSTQQGTSRTSKKVPARALSCPSSNKPDVVYAQPVMSCKQDGVYGQAQSS
SKICGDEIDAGTMTIQKAIQLLCSSDDKYQAMGAYYLQHTCFQDESAKQEVYRLGGIAKL
VELLRSQNQNVQRAAAGALRNLVFKNPTNKIETRRQNGIRECVSLLRRTGNTEIQKQLTG
LLWNLSSTDELKEELIQEALPVLTDCVIIPFSGWSDGSCNRTREIIDPEVFFNATGCLRN
LSSADMGRQTMRNYPGLIDSVMTYTQNCVASSRPDDKSVENCICILHNLSYRLDAEVPNK
YTQLNHMARSVYMDKTLTGCFNSRSGKMENDEYGVPLPEEDFKPKGPSWLYHSDAIRTYL
SLMDQSKKDATLEACAGALQNLTASRGLMSNAMSQMIGLKEKGLPRIARLLQSNSSEVVR
SGASLLSNMSRHPVLHKTMAHQVLPDVSRLLSFQSGNTSSYGEIMTSACYTLRNLIMSNP
HLGKSYLSSNLLNNVVSLCRNGSCPKAAEAARLLLTDLWSNRELQSVLKQQGFDKNMMGS
LAGTTFRTLSSRF
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgctccactccccgctgaaaacggcgctggcctacgagtgcttccaggaccaggcgagc
tccacgctggccctgccctcggaccacaagttgaaaaccaagggcacgggcaagcagcgc
gtccaggagcaggtgatgatgacggtcaagaggcagaagcaaaaatcgtcggtatcgtca
agcgtgggccactcaaaccgaggttccatgtatgatggtttagctgatggctatggctac
gggacatcccggggcagctactacaccaaaacccagacagggaacagcaactggggatac
ccgctctacaacgggacgctgaagcgggacgtggagaaccggcgctacagctcctacagc
cagatggagggctgggccagccgggcgcacagcaaggcgctgtgcagcccccgggccggc
agcgattactgcttcgtgcagaacatcaagagcagccgcagcgagcccgacctctactgc
gagccgccccgcggcaccctgcgcaaggcgcacggcggcggccgcgccgagcacaaggcc
accctcaaccgccagagcatctacagcagctgcagcacccagcagggaaccagcaggaca
agcaaaaaggtgccagcgcgggccctctcctgcccctcgagcaacaagcccgacgtggtc
tatgcccagcccgtgatgagctgcaagcaggatggggtctatggacaggcccagtccagc
tccaagatctgtggtgatgagattgatgctggcaccatgaccatccagaaggccatccag
ctcctgtgctcctctgatgacaagtaccaggccatgggggcttactacctgcagcacacc
tgcttccaggatgagtctgccaagcaggaggtctatcggctggggggcattgccaagctc
gtggagctgctccgcagccagaaccagaacgtgcagcgggcggcagccggcgccctccgg
aacctggtgttcaagaaccccaccaacaagatcgaaacccggcggcagaacgggatcagg
gagtgtgtgagcctcctccgcaggacagggaacactgaaatccagaaacagctcacagga
ctgctctggaacctctcctccactgatgaactaaaagaagagttgatacaggaggctctg
cctgtgctgacagactgtgttatcatccctttctcgggctggtctgatggcagctgcaac
aggacacgagaaattatcgacccagaagtgttcttcaatgccacagggtgtttgaggaac
ctgagctctgcagacatggggcgccagaccatgaggaattaccctggcctgatcgactct
gtcatgacttacacccagaactgcgtggcctccagccgccctgatgacaagtctgtggag
aactgcatctgcatcctgcacaacctctcctaccgcctggatgctgaggttcccaacaaa
tacacccagctcaaccacatggcccggagcgtttacatggacaaaactctcacaggctgc
ttcaacagcaggagtgggaaaatggagaatgatgagtatggggttccccttcctgaggag
gatttcaagcccaaaggccccagctggctgtaccactcagatgccatccgcacctacctg
tccctgatggatcagagcaagaaggatgccaccctggaggcttgtgctggagctctgcag
aacctcactgcgagccgagggctgatgtccaatgccatgagccagatgatcgggctgaag
gagaaggggctgccccgcatcgcgcggctgctgcagtccaacagctccgaggtcgtgcgc
tccggggcctctctgctcagcaacatgtccaggcatcctgtgctccacaaaaccatggct
caccaggtgctcccagatgtgtcccgtctcctgtcgttccagtctggaaacaccagcagc
tatggggagatcatgacatcagcttgttacactctgaggaacctcatcatgtccaacccc
cacctgggaaagtcttacctgtccagcaacttgctaaataatgtagtgagcctgtgccgg
aatggctcctgtccaaaagcagctgaagctgctcgacttctcctgacagacctttggtcc
aacagggagctgcagagtgtgctgaagcagcaagggtttgataagaacatgatgggatct
ttagctggaacgaccttcaggaccctctcctccagattttag
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