Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459580
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Entry
135459580 CDS
T09958
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
135459580 (C9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zle04131
]
135459580 (C9orf72)
Membrane trafficking [BR:
zle04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
135459580 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
135459580
NCBI-ProteinID:
XP_064591849
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Position
Z:61064373..61085238
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AA seq
481 aa
AA seq
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MSALCPPPSPAVAKTEISLNGESPLLAATFAYWDNILGPRVRHIWAPKTEQVLLSDGEIT
FLANHTLNGEILRNAESGAIDVKFFVLAEKRVIIVSLIFDGNWNGDRSTYGLSIILPQSE
LGFYLPLHRVCVDRLTHIIRKGRIWMHKERQEHFQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDISDTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPSERKCSRLCRSESSFKYESGLFVQGLLKDATGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRANSDEEMSQDHIIHTDESF
TPDLNVFQDIVHRDTLVKAFLDQIFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRSLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDMLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctctttgtccaccaccatctcctgcagttgctaagacagagatctctttgaat
ggcgagtcaccattactagctgccacttttgcttactgggacaatattcttggcccccga
gtgcggcacatttgggctccaaagacagaacaggtacttctcagtgacggtgaaataact
tttcttgctaaccacaccctaaatggagaaatacttcggaatgcagaaagtggtgcaata
gatgtgaagttctttgttttggccgaaaaaagagtaatcattgtgtcattgatctttgat
ggaaactggaacggagacagaagcacatatggactgtcaattatacttccgcaaagcgaa
cttggtttctacctgccccttcacagagtgtgtgtggataggttaacacatattataagg
aaaggaaggatatggatgcataaggagaggcaagaacatttccagaagattgtcttggaa
ggcacagaaagaatggaggatcagggtcagagcatcattccaatgctgacaggagaagtc
attcctgtaatggaactcctttcatctatgaaatcacacagtgttccagaagaaattgat
ataagtgacacagtgctaaatgatgatgacattggggatagttgccatgaaggctttctc
ctcaatgcaattagttcacacctgcagacctgtggttgctctgtagttgtaggaagcagt
gcagaaaaagttaataagattgtgagaacgttgtgcctgtttctcacaccatctgagcgg
aagtgttccagactctgtagaagtgagtcctctttcaaatatgagtcaggactttttgtt
caaggcttactcaaagatgcaacaggaagctttgtgttgcccttccgtcaagtaatgtat
gccccataccctactactcatatagatgtggatgtcaatacagtgaagcagatgccacct
tgtcatgaacacatctataaccaacgacgatacatgagatctgaactgacagcattttgg
agagctaattcagatgaagaaatgtctcaagatcatattatccacacagatgagagtttc
acacctgatttaaatgtctttcaagatatcgtgcatagagatacattagtaaaagccttc
ctggatcagatttttcacctgaagcctggcttgtctctaaggagtactttccttgcacaa
tttctgctagtccttcacagaaaagccttaactttaataaagtacatagaggatgacacg
caaaaaggcaaaaaaccttttaagtctcttcgtagcttaaagatagatcttgacttgaca
gcagagggcgatcttaacataataatggctttggctgagaagattaaaccaggtctacac
tcctttatctttgggaggccgttctacaccagtgtacaagaacgcgacatgcttatgaca
ttttaa
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