Zonotrichia leucophrys gambelii (white-crowned sparrow): 135459778
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Entry
135459778 CDS
T09958
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
zle
Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle00310
Lysine degradation
zle01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
zle00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
135459778 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zle03000
]
135459778 (PRDM6)
03036 Chromosome and associated proteins [BR:
zle03036
]
135459778 (PRDM6)
Enzymes [BR:
zle01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
135459778 (PRDM6)
Transcription factors [BR:
zle03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
135459778 (PRDM6)
Chromosome and associated proteins [BR:
zle03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
135459778 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
135459778
NCBI-ProteinID:
XP_064592185
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All DBs
Position
Z:67119899..67195895
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AA seq
571 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPQSSQLKSSGALAQLQPPERAEPPADSLRQRPT
SLSSASSSSSSSTPSSSSTSSCVAAAAASLAGLTSLPVTQVPVFGPLQSSELPAGAAPAP
LQGKDLCGAGGGKCGERGAARYRCTAEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMCAD
NRNGECPMHGPLHSLRRLVGTSSAAAAAPPPEIPEWLRDLPREVCLCTSTVPGLAYGICA
AQRIQQGTWIGPFQGILLLPEKVQAGAIRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMR
YIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQDEN
LNVPSTVMEAMSRQDTLQPFNKSSKLSPATPQRSIVFPQTPCSRNFSLLDKSGSIESGFN
QISVKNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCG
HCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCER
SFTQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccaggagatcccggcggatccgcgttcctgaaggtggatcccgcctatctg
cagcactggcagcagcttttcccgcagagcagccagctcaaaagcagcggggccctcgcc
cagctccagccacccgaaagagccgagcccccggctgacagcctccgccagcgcccgacc
tccctctcctccgcctcctcctcctcttcctcgtccactccgtcttcctcctccacctcg
tcctgcgtcgctgcagccgccgcttctctggccggcctgacctccctgcccgtgacccag
gtcccggtgttcggcccgctgcagagctcggagctcccggccggggcagctcccgctccc
ctgcagggcaaggatttgtgcggggccggcggcggcaaatgcggcgagcgtggcgccgct
cggtaccgctgcacggccgaggagctggactactacctgtacgggcagcagcgcatggag
atcatccccctgaaccagcacaccagcgaccccaacaaccgatgcgacatgtgcgcggat
aaccggaacggcgagtgcccgatgcacgggcccctgcactccctgcgccggctggtgggc
accagcagcgccgccgccgccgctccgccgcccgagatccccgagtggctgcgggacctg
ccccgcgaggtgtgcctgtgcaccagcaccgtgcccggcctggcctacggcatctgcgcc
gcgcagcgcatccagcagggcacctggatcgggcccttccagggaatcttgctcctgccg
gagaaggttcaagcaggtgccatcaggaacactcagcacctctgggaaatatatgaccaa
gacgggacactgcagcactttatcgatggtggagaacccagcaagtcgagctggatgagg
tacatccgatgtgccaggcactgtggggagcagaacttaaccgtggttcagtacaggtca
aatatattctaccgggcttgtatagatatccccaggggcactgagctgttagtgtggtac
aatgacagctacacgtctttctttggaatccccctccagtgcattgcacaagatgaaaat
ttgaatgtcccttcgactgtaatggaggccatgtccagacaagacaccctacagccattt
aataaaagtagcaaactatcccctgccactccacagcgatccatagtatttccacagact
ccgtgtagccgaaatttttctctcctggataagtctgggtccatcgagtcaggatttaac
cagatcagtgtcaaaaaccaacgagttcttgcaagcccaacttcaacaagccaactaaat
tctgagttcagtgactggcatctttggaaatgtgggcagtgctttaagactttcacccag
cggatcctcttgcagatgcatgtgtgtacgcagaaccctgacaggccctaccagtgcggc
cactgctcgcagtccttctcgcagccctcggagctgcgcaaccacgtcgtgacgcactcc
agcgacaggcccttcaagtgcggctactgcgggcgcgccttcgccggggccaccacgctc
aacaaccacatccgcacgcacaccggggaaaagcccttcaagtgcgagaggtgtgagagg
agcttcacacaagccacccagctgagtcgacaccagaggatgcccaatgagtgcaagcca
ataacagagagcacagaatcaattgaagtggattaa
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