KEGG   Zonotrichia leucophrys gambelii (white-crowned sparrow): 135460999
Entry
135460999         CDS       T09958                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DR beta 4 chain-like
  KO
K06752  MHC class II antigen
Organism
zle  Zonotrichia leucophrys gambelii (white-crowned sparrow)
Pathway
zle04145  Phagosome
zle04514  Cell adhesion molecules
zle04672  Intestinal immune network for IgA production
zle05164  Influenza A
zle05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:zle00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    135460999
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    135460999
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    135460999
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    135460999
   05168 Herpes simplex virus 1 infection
    135460999
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:zle04147]
    135460999
Exosome [BR:zle04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   135460999
  Exosomal proteins of epithelial cells
   135460999
  Exosomal proteins of breast milk
   135460999
SSDB
Motif
Pfam: MHC_II_beta C1-set
Other DBs
NCBI-GeneID: 135460999
NCBI-ProteinID: XP_064594051
LinkDB
Position
Unknown
AA seq 205 aa
MGRGAAAGALLVALVVLGAPPAAGTELSAVFLHMGRHECYFINGTEKVMSVQRYIYNRET
YVVFESDVGVHVGFTSYEERFAREINSDPKWMVEQRTAVDWYCRGNYEVIRPFTVARRVP
PSVSISLVPPSSSQPGPGRLLCSVMDFYPAAIQVRWFQGQQELSEHVVATDVVPNGDWTY
QLLVLLETPPPGAGSATAARWSTSA
NT seq 618 nt   +upstreamnt  +downstreamnt
atggggcgaggggcggcagctggggccctgctggtggcactggtggtgctgggagcaccc
ccggctgcgggcacggagctctcggcggtgtttctgcacatgggaaggcatgagtgttac
ttcattaacggcacggagaaggtgatgtccgtgcagaggtacatctataaccgggagacg
tacgtggtgttcgaaagcgacgtgggggtgcacgtggggttcacctcctatgaggagagg
tttgccagggagattaacagcgacccgaaatggatggtggaacaacggactgcggtggac
tggtactgccggggcaactacgaggtgattcgcccgttcactgtggcgcgccgagtgccc
cccagcgtgtccatctcgctggtgcccccgtcgagctcccagcccggccccggccgcctg
ctctgctccgtgatggatttctaccctgctgccatccaggtgaggtggttccagggccag
caggagctctcggagcacgtggtggccaccgacgtggttcccaacggggactggacctac
cagctgctggtgctgctggaaacccccccccccggcgcgggctcagctacagctgccagg
tggagcacgtcagcctaa

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