Zea mays (maize): 100191337
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Entry
100191337 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100191337
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
zma
Zea mays (maize)
Pathway
zma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100191337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100191337
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100191337
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
Arf
AAA_29
ORC-CDC6-like
nSTAND3
ATP-synt_ab
AAA_23
AAA_24
AAA_15
Motif
Other DBs
NCBI-GeneID:
100191337
NCBI-ProteinID:
NP_001130243
UniProt:
B4F8G7
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Position
9:139906800..139919892
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AA seq
323 aa
AA seq
DB search
MAPTVEISHLTFTYPGIDGRPPPGAPPLIEDVCFSLDAGQRCLLLGSNGAGKTTILKILG
GKHMVDPSMVRVLGRSAFHDTALTSSGDLSYLGGEWRRDVAFAGYQVNIQMDISAEKMIF
GIAGVDPKRRDELIKILDIDLTWRMHKASDGQRRRVQICMGLLKSFKVLLLDEITVDLDV
LARSNLLSYLKKECEERGATIIYATHIFDGLDDWPTHIVYIAHGKLQLAVPLEKVKEMSQ
LSLMRTVESWLRKERNEDRRRRKERKEKGLPEFDKVVEGSRVIGDPAKNADRVINNGWAA
GRLTSTIAGEENFVFSSNSVLRQ
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaacggttgagatcagccacctcaccttcacctaccccggcatcgacggccgc
ccgccacccggcgcgccaccgctcatcgaggacgtctgcttctccctcgacgccggccaa
cgatgcctcctcctcggctccaacggcgcaggcaagacgacgatactgaagatactaggc
gggaagcacatggtggatccgagcatggtgcgggtcctgggaaggtccgccttccacgac
acggcactcacctcctccggcgacctctcctatctcggcggtgagtggagacgcgacgtg
gcctttgctggctaccaggtgaacattcagatggatatatcggcagagaagatgattttt
ggtattgctggtgttgatccaaagaggagagacgagcttatcaagattttagacatcgac
ctcacctggcgcatgcacaaggcatcagatggtcagaggagacgtgtccagatttgcatg
ggacttcttaagtcattcaaggttcttcttcttgatgagatcacagttgatcttgatgtt
ctggcaagatcaaatctgttatcgtatcttaaaaaggaatgtgaggaaagaggtgcaaca
atcatctatgccacacatatttttgatggtcttgatgattggccaacacacattgtttac
attgctcatgggaaactgcaattagcagtgcctttggaaaaggtgaaagaaatgagtcag
ttatctctcatgaggactgtggagagctggttgaggaaagaaagaaatgaggacaggagg
aggagaaaggagcgaaaggagaaaggcctcccagaattcgacaaggttgtcgagggtagt
cgggttataggtgatccagcaaagaacgcagacagagttataaacaacgggtgggcagct
ggacggcttacctcgacgattgcaggagaggaaaatttcgtcttcagctctaacagcgta
cttaggcaatga
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