Zea mays (maize): 100281419
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Entry
100281419 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100281419
KO
K16189
phytochrome-interacting factor
Organism
zma
Zea mays (maize)
Pathway
zma04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100281419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zma03000
]
100281419
Transcription factors [BR:
zma03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
100281419
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
DUF3439
HNF-1_N
Motif
Other DBs
NCBI-GeneID:
100281419
NCBI-ProteinID:
NP_001348423
UniProt:
A0A804M0W2
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Position
1:complement(258566340..258579384)
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AA seq
539 aa
AA seq
DB search
MNQFVPDWSNMGDTSRPLGEEDDLIELLWCNGHVVMQSQSHRKVPPRPEKAAAVAAPPAP
ASVPQEDEGGLWFPFALADSLDKDIFSEFFCEAPTPAPAAADAAPAASGGGTGTEAGGKS
CGGDVPVPAEDDRRGGGGACAVSAGDPCDLMPPPKSTPASCSRQQTTMSLANGGDNAGGD
LPGLVRAGAEAGASSMLSAIGSSICGSNQVLVQRAACAPGRASASGSGTARGDGSGSAAL
PSAVGSANANAVGGGRGHEASSSGRSNYCCFGAATTTTTTTTTEPASTSNRSSKRKRLDT
EDSESPSEDAESGSAAMLARKPPQKMTTARRSRAAEVHNLSERRRRDRINEKMRALQELI
PHCNKTDKASMLDEAIEYLKSLQLQVQMMWMGSAGIAAPPAVMFPGVHQYLPRMGVGMGA
AAAAALPSMPRLPFMAPQPVVPSAPVSVGPVPAYRGHMPAVGITEPYGHYIGVNHLQPAP
PPPQVQGVSYYPPPLGATAKAVQQAAELHHVPGPGGSIMPAGAAPGVLLPESAQGRGPG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagttcgtccctgattggagcaacatgggagacacctccaggccgctcggcgaa
gaagacgacctcatcgagctgctctggtgcaacggccatgtcgtcatgcagagccagagc
caccggaaggtgccgccgaggccggagaaggcggcggcagtggcggctccaccagccccc
gcgtccgtgccgcaggaagacgagggcggcctgtggttccccttcgcgctggccgactcg
ctggacaaggacatcttctcggagttcttctgcgaggcaccgacgccggcaccggcggcg
gcggatgcggcgccggcggcctctggtggtggaaccggcaccgaagccggcggcaagtcg
tgcggcggggacgtcccagtcccagcagaggacgacaggcgcggcggcggcggggcgtgc
gcggtgtcggcgggggacccgtgcgacctgatgccgcctcccaagtcgacgcccgcgtcc
tgctccaggcagcagacgacgatgagcctggccaacggcggcgacaatgccggaggggac
ctgccgggcctcgtccgtgcgggggcggaggccggcgcgtcgtcgatgctgagcgcgatc
gggtccagcatctgcgggagcaaccaggtcctggtgcagcgcgcggcgtgcgcgccgggg
cgcgcgtccgcgtccggctccggaaccgcccgcggcgacgggtccgggtccgccgcgctg
ccgtcggcggtgggcagcgcgaacgcgaacgccgtgggcggcggcaggggccacgaggcg
tcctcgtcggggcggtccaactactgctgcttcggcgccgccaccaccacaaccacaacc
accaccacggagcccgcgagcaccagcaaccggagcagcaagcgcaagcggctcgacacc
gaggactcggagagtcccagcgaggacgcggagtcggggtccgccgcgatgttggcgcgc
aagccgccgcagaagatgacgacggcgcggaggagccgcgccgccgaagtgcacaacctg
tcggagcggaggagacgagacaggataaacgagaagatgagagccctgcaagagctcata
cctcactgcaacaagacggacaaggcgtcaatgcttgacgaggcgatcgagtacctcaag
tcgctgcagctgcaagtgcagatgatgtggatgggcagcgccggcatcgcggcgccgccg
gcggtgatgttccccggcgtacaccagtacctgcctcggatgggcgtcgggatgggcgcg
gcagcggcggcggcgctgccgtccatgccgcggctgccgttcatggccccgcaaccggtg
gtgcccagcgcgccggtgagcgtgggcccggtgccggcctaccggggccacatgcccgcg
gtgggcatcacggagccgtacgggcactacatcggcgtcaaccacctgcagccggcgccg
ccgccaccgcaggtccagggcgtgagctactacccgccgccgctgggggcgacggcgaag
gccgtgcagcaggctgcagagcttcaccacgtgccggggcccggcggcagcatcatgccc
gccggcgccgcacccggagtgctgctcccggagagcgcgcaaggcagagggccagggtga
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