Zea mays (maize): 100282925
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Entry
100282925 CDS
T01088
Name
(RefSeq) uncharacterized protein LOC100282925
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
zma
Zea mays (maize)
Pathway
zma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100282925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zma03019
]
100282925
Messenger RNA biogenesis [BR:
zma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100282925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ORC-CDC6-like
AAA_29
nSTAND3
AAA
AAA_28
NACHT
SMC_N
AAA_25
AAA_15
AAA_23
AAA_5
AAA_30
AAA_18
AAA_22
SRP54
Zeta_toxin
PduV-EutP
AAA_24
AAA_33
Arf
AAA_16
AAA_14
Rad17
AAA_7
Motif
Other DBs
NCBI-GeneID:
100282925
NCBI-ProteinID:
NP_001149302
UniProt:
B6TCU4
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All DBs
Position
4:177233082..177237200
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AA seq
295 aa
AA seq
DB search
MAGEGNGDEGWRRSGIEVSALQFGYDGQPPLFARFNLCVAPGSRCLLVGANGSGKTTLLK
ILAGKHMVGGRDVVRVLNGSAFHDTQLVCNGDLSYLGGSWSRTIGSAGDVPLQGDFSAEH
MIFGVDGVDPVRREKLVDLLDIDLQWRMHKVSDGQRRRVQICMGLLHPYKVLLLDEITVD
LDVVTRMDLLGFFKEECEQREATIVYATHIFDGLETWATDFAYIQEGELRRSGRYSDIEE
LRSAKNLLSVVESWLRSETKLPKKEPPPRPETQARRSSPFDASPFRSSRHMAYYR
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgaagggaatggggatgaagggtggaggcggagcggcatcgaggtcagcgcc
ctgcagttcggctacgacgggcagccgccgctcttcgcgcgcttcaacctctgcgtcgca
cccggctcccgctgcctcctcgtcggcgccaacggatcaggcaagaccacactcttgaag
attcttgcgggaaagcatatggttggaggaagagatgtggtccgtgtcctcaatggttcc
gcttttcatgatacacagctagtgtgcaatggtgacctttcgtacttgggtggttcttgg
agccgtactattggttcagctggggatgttccactgcaaggcgacttctctgctgagcac
atgatttttggagttgatggggttgatcctgtcaggcgagagaagctggttgatctgcta
gacattgatctgcagtggcgcatgcataaagtttcagatgggcagcgccgcagggtgcaa
atctgcatgggtcttcttcatccatacaaggtgcttttgctcgatgagatcacggttgat
ctggacgtggtgaccaggatggacctgcttggtttcttcaaggaagagtgcgagcagagg
gaagctaccatcgtgtacgccacccatatatttgacggactcgagacgtgggctaccgac
tttgcgtacatccaagaaggcgagctgagaaggtccgggagatactccgacatcgaggag
ctaaggagcgccaagaacttgctgtcggtagtcgagtcgtggctgaggtcagagaccaaa
cttccgaagaaggaacccccaccacgtcctgagacccaggccaggcgttcctcgccgttc
gatgcttctcctttccgttcgtcacgccacatggcctactaccgttga
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