Zea mays (maize): 103633219
Help
Entry
103633219 CDS
T01088
Name
(RefSeq) DNA repair protein RAD16 isoform X1
KO
K15083
DNA repair protein RAD16
Organism
zma
Zea mays (maize)
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zma03400
]
103633219
DNA repair and recombination proteins [BR:
zma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NER4 complex
103633219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
ResIII
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
103633219
NCBI-ProteinID:
XP_008653135
LinkDB
All DBs
Position
7:161584583..161591445
Genome browser
AA seq
856 aa
AA seq
DB search
MTRRGRNPSSRSSSGRRRRRDQEDEDDLPSDDTSDTDFVADSGDAVENDDSDEEFAPDKD
TPPAPAVPEAALPPPVPIRIKNQARNRREKRRRGKKARRDAPPLPWEEWQVANDSWLDER
NAADGGVEATDATVAAVPTADPAPEVVLRLLRFQKEWLAWALAQEASVTRGGILADEMGM
GKTIQAISLVLTARRLRPPDHHSAASSSNSSVGRTKPQVGCTLVVCPVVAVIQWTEEIER
HTASGSVRVLIYHGAKRVTQSFDFNSYDFVITTYSTIEADYRKHIMPPKTRCQYCNKLFY
PNKMKVHLMYHCGPNAKRTEAQAKQQSKRKWDSSKEKVKEKRRVHKKGDEVNKDFQELAD
ELGRQLRGQSPLHSVRWERVILDEAHFIKDRRCNTARAVFALESECKWALSGTPLQNRVG
ELYSLIRFLQIFPYSYYFCKDCSCEILDTSMKKQCDCGHSSVRHFCWWNKYISTPIQYGS
TSFEGKRAMTLLKEKVLKGIVLRRTKKGRAADLALPPKIVTLRRDSFDKNEMEFYEALYT
QSVTQFDAYVDAGTLMNNYAHIFDLLTRLRQAVDHPYLVAYSKTAGHPEGMKNEGNESME
SQCGICHNLAEDVVVTSCDHAFCKTCLIDYSAALGNVSCPSCSIPLTVDLTAQNSVGKVT
RSVKGRKCSGILSRLPSLVDFKTSTKIDALREEIRNMIEHDGSAKGIVFSQFTSFLDLIQ
FSLERSGIKCVQLNGAMNITEKGRAIDTFTHDADCRVFLMSLKAGGVALNLTVASHVFLM
DPWWNPAVENQAQDRIHRIGQFKPIKSTRFVIKDTVEERILQLQQKKQLVFEGTVGDSPD
AMSKLTEADLKFLFQI
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgccgaggcaggaacccctcctccagatccagtagcggccgccggcgccgccgc
gaccaggaggatgaggacgacctcccctctgacgacacctccgacaccgatttcgtcgcc
gactccggggacgcggtggagaacgacgacagcgacgaggagttcgcgcccgataaggac
accccgcccgcgcccgcggtgcccgaggcggccctgccgccgccggtgccgatccggatt
aagaatcaggcgcggaacaggagggagaagaggaggcgaggtaagaaggcgaggagggac
gcgccgcccctgccatgggaagagtggcaggtggcaaacgacagttggctcgacgagcgg
aacgcagccgacgggggcgtcgaggccacggacgccacggtggcggccgtgccgaccgcg
gacccggccccggaggtggtgctccgattgctgcgtttccagaaggagtggctcgcttgg
gcgctcgcgcaggaggcgtccgtcacgcggggcggcatcctcgccgacgagatggggatg
gggaagaccatccaggctatctcgctcgtcctaaccgcgcgccgcctccggcccccggac
catcactccgccgcctcctcgtccaactcctcggtgggccgcaccaagccccaggtcggg
tgcacgctggtcgtctgccctgtggtggccgtcatccagtggactgaggagatcgaacgc
cacactgctagtggcagcgtgcgcgtgctcatctaccacggtgccaagcgtgtcactcag
agtttcgatttcaacagctatgactttgttatcaccacctactctaccattgaggcggac
taccggaagcacatcatgccgcccaagactcggtgccaatactgcaataaattgttctac
cccaacaagatgaaggtgcacttgatgtatcactgtgggcctaatgctaaacgcacagaa
gctcaggctaagcagcagagcaagaggaagtgggacagcagcaaggaaaaggtgaaggag
aagaggagggttcataagaagggtgatgaggtgaataaggattttcaagagttggctgat
gaactgggcagacagttaaggggccaatctcctctgcattctgtgcggtgggagcgtgtt
atcctggatgaggctcacttcataaaagatagacgatgtaatactgcacgggctgttttt
gcattggagtcagaatgcaagtgggctctgagtggaacacctttgcagaaccgtgttgga
gaactttactctcttattcggtttttgcaaatcttcccctactcatactatttctgcaag
gactgtagctgtgagatactagataccagtatgaagaaacaatgcgactgtggtcactca
tctgttaggcacttttgctggtggaataagtacatatcaacaccaatacagtatgggtca
acaagtttcgaaggaaaaagagccatgactcttctgaaggaaaaagttctgaaaggcata
gtgttaaggcgcacaaagaaaggccgagcagcagatcttgctcttccaccaaagattgtg
acattgaggcgggactcttttgataaaaacgaaatggaattctatgaagctttgtacact
cagagtgtcacacaatttgatgcatatgtagatgctggaacactgatgaataactacgct
catatcttcgatcttctcacaaggttgagacaggctgttgatcatccctatcttgtagca
tattctaaaacagcaggacatcctgaaggaatgaagaatgaaggaaacgagtccatggag
agccaatgtggtatatgtcataatttggctgaagatgttgtggttacctcttgtgatcat
gcattctgcaagacttgtttgatagactactctgcagctttggggaatgtttcatgtcca
tcctgttcaatacctctcaccgtggacttaacagcacaaaattcagttggaaaagtaact
cgaagtgtcaagggtcgcaaatgttcaggaatattgagcagactaccaagccttgtggat
tttaagacgagtacaaaaattgatgccttgagggaggagataagaaacatgattgagcac
gatggttctgccaaagggattgtcttcagccagttcacatcattcttggatttgattcag
ttttccttggagaggtccggcattaagtgtgtccagttgaatggagccatgaacattacc
gaaaagggaagagccatagacaccttcacccatgatgcagactgcagggtcttcttgatg
agcttaaaagctggaggagtcgctctgaatctcactgtagcatctcatgtgttcctgatg
gacccttggtggaatccagcggtcgagaaccaagcgcaggaccgtatccaccgaattggg
cagttcaagccaatcaagagcactaggtttgtgataaaggacacggttgaagagcgcata
ctgcaactgcaacagaagaagcagctggtgtttgaaggcaccgtgggggactcgccggat
gccatgtcgaagcttacagaggcggacctcaagtttctgtttcagatctaa
DBGET
integrated database retrieval system
