Zea mays (maize): 103636724
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Entry
103636724 CDS
T01088
Name
(RefSeq) transcription factor PHYTOCHROME INTERACTING FACTOR-LIKE 13
KO
K16189
phytochrome-interacting factor
Organism
zma
Zea mays (maize)
Pathway
zma04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103636724
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zma03000
]
103636724
Transcription factors [BR:
zma03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103636724
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
103636724
NCBI-ProteinID:
XP_020398119
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All DBs
Position
8:8350633..8355770
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AA seq
326 aa
AA seq
DB search
MDGNTRFAAESQKKPIVLDDDLVELLWHNGSVVAQPQAHHRPAPPSDRDRPGTSGLTAEE
TAAWFLNTLDDPLEKDLYTQLWYNTIADAAPQHEGTFPGPTSHPSSPPPPVGSSGVESSW
AGDICSTFCGSNQVPRTPTGIRGKDAALQSEVPSDAGAHDGTSSSGGSGSNYGGSGLPSD
SVHGHKRKGMCRDESDSRSEVKLRDAECEEAIEETKPWQRHGPKRRTRAAEVHNLSERRR
RDRIKEKMRALQELIPHCNKTDKASILDETIEYLKSLQMQFQIMWMTSINMRSFSYNNIK
LGIPSMTPSFIRDELAADGKVYSHSL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggacggcaatacgaggttcgcagcagagagtcagaagaagcccatcgtcctagacgac
gacctcgtggagctattgtggcacaatgggagcgtcgtagcgcagccccaggcgcaccac
aggccggcgccgccctctgaccgcgaccgcccgggcaccagcggcctcactgccgaggag
accgccgcgtggttcctgaacaccctcgacgacccgctggagaaggacctgtacacgcag
ctctggtacaacacgatcgccgatgccgccccacaacacgagggcacgttcccgggccct
acctcgcatccttcgtcgccgccgccacccgttgggagcagcggcgtcgagtctagctgg
gccggcgacatctgctcgaccttctgcggcagcaaccaggtgcccaggacgccgacgggg
atcagggggaaggacgcggcattgcagtcggaggtgccgagcgatgccggcgcgcatgac
ggcacatcgtcatccggtgggtccggaagcaactatgggggatccgggctgcccagtgac
agcgtccatggccacaagaggaagggaatgtgtagagacgagtcagatagtcgaagtgag
gtgaaattgcgggatgccgagtgtgaggaggcaattgaggagaccaaaccctggcagcgg
catgggccgaaacgtcggactcgtgcagctgaagtccataatctctcagagaggagaaga
agggaccggatcaaagaaaagatgcgtgcgttgcaagagctgatcccacactgcaacaag
actgacaaagcatctatactagacgagacaattgagtatctaaagtccctccaaatgcaa
tttcaaataatgtggatgacttcaataaatatgagatcattttcttataacaatataaag
ctggggattccaagcatgaccccaagtttcatcagagatgaactagctgctgatggaaag
gtatactcccacagcctctga
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