Zymomonas mobilis subsp. mobilis ATCC 29191: ZZ6_0883
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Entry
ZZ6_0883 CDS
T02187
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
zmb
Zymomonas mobilis subsp. mobilis ATCC 29191
Pathway
zmb03030
DNA replication
zmb03410
Base excision repair
zmb03420
Nucleotide excision repair
zmb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ZZ6_0883
03410 Base excision repair
ZZ6_0883
03420 Nucleotide excision repair
ZZ6_0883
03430 Mismatch repair
ZZ6_0883
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zmb03032
]
ZZ6_0883
03400 DNA repair and recombination proteins [BR:
zmb03400
]
ZZ6_0883
Enzymes [BR:
zmb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
ZZ6_0883
DNA replication proteins [BR:
zmb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ZZ6_0883
DNA repair and recombination proteins [BR:
zmb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
ZZ6_0883
NER (nucleotide excision repair)
GGR (global genome repair) factors
ZZ6_0883
MMR (mismatch excision repair)
DNA ligase
ZZ6_0883
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ZZ6_0883
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
BRCT
HHH_2
DNA_ligase_ZBD
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
AFN56776
LinkDB
All DBs
Position
complement(1000609..1002804)
Genome browser
AA seq
731 aa
AA seq
DB search
MNADIDLFSYLNPEKKDLSALAPKDLSREQAVIELERLAKLISHYDHLYHDKDNPAVPDS
EYDALVLRNRRIEQFFPDLIRPDSPSKKVGSRPNSRLPKIAHRAAMLSLDNGFLDQDVED
FLGRVRRFFNLKENQAVICTVEPKIDGLSCSLRYEKGILTQAVTRGDGVIGEDVTPNVRV
IDDIPKTLKGDNWPEIIEIRGEVYMAKSDFAALNARQREENKKLFANPRNAAAGSLRQLD
PNITARRALRFLAHGWGEATSLPADTQYGMMKVIESYGLSVSNLLARADNIGQMLDFYQK
IEAERADLDFDIDGVVYKLDQLDWQQRFGFSARAPRFALAHKFPAEKAQTTLLDIEIQVG
RTGVLTPVAKLEPVTVGGVVVSSATLHNSDEIERLGVRPGDRVLVQRAGDVIPQIVENLT
PDVDRPIWHFPHRCPVCDSVARREEGEVAWRCTGGLICPAQRVERLCHFVSRTAFEIDGL
GKSHIESFFADKLIETPADIFRLFQKRQFLIERDGWGELSVDNLISAIDKRRKVPFDRFL
FALGIRHVGAVTARDLAKSYQTWDNFKAAIDEAVHLRTILQPSSEESEEKYQKRVDKELI
SFFHIPNMGGKIIRSLLDFFAETHNSDVVSDLLQEVQIEPLYFELASSPLSGKIIVFTGS
LQKITRDEAKRQAENLGAKVASSVSKKTNLVVAGEAAGSKLSKAKELDISIIDEDRWHRI
VENDGQDSIKI
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcggatattgaccttttctcttatctgaatcctgaaaaaaaggatttgtcagct
ctggctccgaaagatttatctcgtgaacaagcggttattgaattggaacgcttggcaaag
ttgatcagccattacgatcatctttatcatgataaggataatccggctgttcctgatagc
gaatatgatgccttggtcttgcgaaaccgtcggattgaacagttttttcctgacttaatc
cggccggattctccaagtaaaaaagtcggtagtcgtcctaattcacgtttacccaaaatc
gcccatcgggcagcgatgcttagtcttgataatggttttctggatcaggatgttgaagat
tttttgggtcgggttcgccgttttttcaatttaaaagaaaatcaggccgtcatttgcact
gttgaaccaaaaattgacggtctatcttgctctttgcgttatgaaaaaggcattttaact
caggcagttacacggggagatggggtcatcggtgaggatgttacacccaatgtccgcgtt
attgatgacatccccaaaacattaaaaggcgataattggccagaaattattgaaattcgt
ggcgaagtttacatggcaaaaagcgattttgctgctttgaatgctcgtcagagagaagaa
aataaaaagctttttgccaatcctcgcaatgcggcggctgggtctttgcggcagctagac
ccgaatattaccgcaagacgtgctcttcgctttttggcgcatggttggggcgaggctaca
tctctacctgccgatacccaatacggcatgatgaaagtgatagaaagctatggcttgtct
gtcagtaatctgctggctcgtgctgacaatattggtcagatgctcgatttctatcagaaa
atagaggctgaacgggctgatttagattttgatattgatggtgtcgtttataaattagat
cagctcgattggcagcaaagatttggattttcagcgcgtgccccacgttttgccttggcg
cataaattcccagcagaaaaagcacaaacgacgcttttagatatcgagatacaggttggg
cgtacgggcgttttgacacctgtggctaaattagagcctgtaacggttggaggggtcgtt
gtctcttctgcgaccctccataactctgatgaaattgagcggttgggtgtccgtccgggc
gatcgggttctggttcaacgtgctggagatgttattccccagatagtcgaaaatctaacc
cctgatgtcgatcgtccgatttggcatttcccgcatcgctgtccagtttgtgactctgtt
gctagaagggaagaaggggaagtcgcctggcgttgcaccggaggtttgatctgtccagcg
caacgcgttgagcgcttgtgccatttcgtttcgcgcactgcctttgaaattgatggctta
ggtaaaagccatatcgaaagtttttttgccgataaattgattgaaacacctgccgatatt
tttcggttatttcaaaaacgtcagtttttgatcgagagggacggctggggtgagctttct
gtcgataatttaatatcggctatcgacaaacggcgaaaagtcccgtttgatcgttttctt
tttgccttgggtattcgccatgtaggtgctgtaacggcgcgggatttagctaaatcttac
caaacatgggataattttaaagcagccattgatgaggcggttcatctacggactatatta
cagccttcaagtgaagagtctgaagaaaagtatcaaaaaagggtagataaagagcttatc
tcttttttccatatccctaatatgggtggtaaaatcattcgaagccttctggattttttt
gctgaaacccataattccgatgttgtttctgatcttttacaggaagttcaaattgagcct
ctttattttgagctggcctcttcgcctttgtcaggaaagattattgtttttactggaagc
ctgcaaaaaataacgagagatgaggctaagcgacaagctgaaaatctgggtgctaaagtg
gcttcatccgtttcaaaaaagactaatcttgttgtcgcgggagaggccgcaggttctaag
ctttcaaaagcgaaagagctggatatttctattatagatgaggatagatggcatcgtatc
gtagaaaatgacgggcaagacagtataaaaatctaa
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