Zymomonas mobilis subsp. mobilis NCIMB 11163: Za10_0875
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Entry
Za10_0875 CDS
T01110
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
zmn
Zymomonas mobilis subsp. mobilis NCIMB 11163
Pathway
zmn03030
DNA replication
zmn03410
Base excision repair
zmn03420
Nucleotide excision repair
zmn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Za10_0875
03410 Base excision repair
Za10_0875
03420 Nucleotide excision repair
Za10_0875
03430 Mismatch repair
Za10_0875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zmn03032
]
Za10_0875
03400 DNA repair and recombination proteins [BR:
zmn03400
]
Za10_0875
Enzymes [BR:
zmn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Za10_0875
DNA replication proteins [BR:
zmn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Za10_0875
DNA repair and recombination proteins [BR:
zmn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Za10_0875
NER (nucleotide excision repair)
GGR (global genome repair) factors
Za10_0875
MMR (mismatch excision repair)
DNA ligase
Za10_0875
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Za10_0875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
DZR_2
Motif
Other DBs
NCBI-ProteinID:
ACV75421
LinkDB
All DBs
Position
complement(1000476..1002671)
Genome browser
AA seq
731 aa
AA seq
DB search
MNADIDLFSYLNPEKQDLPALAPKDLSREQAVIELERLANLISHYDHLYHDKDNPAVPDS
EYDALVLRNRRIEQFFPDLIRPDSPSKKVGSRPNSRLPKIAHRAAMLSLDNGFLDQDVED
FLGRVRRFFNLKENQAVICTVEPKIDGLSCSLRYEKGILTQAVTRGDGVIGEDVTPNVRV
IDDIPKTLKGDNWPEIIEIRGEVYMAKSDFAALNARQTEENKKLFANPRNAAAGSLRQLD
PNITARRSLRFLAHGWGEATSLPADTQYGMMKVIESYGLSVSNLLARADNIGQMLDFYQK
IEAERADLDFDIDGVVYKLDQLDWQQRFGFSARAPRFALAHKFPAEKAQTTLLDIEIQVG
RTGVLTPVAKLEPVTVGGVVVSSATLHNSDEIERLGVRPEDRVLVQRAGDVIPQIVENLT
PDVDRPIWHFPHRCPVCDSVARREEGEVAWRCTGGLICPAQRVERLCHFVSRTAFEIDGL
GKSHIESFFADKLIETPADIFRLFQKRQLLIEREGWGELSVDNLISAIDKRRKVPFDRFL
FALGIRHVGAVTARDLAKSYQTWDNFKAAIDEAAHLRTILQPSSEESEEKYQKRVDKELI
SFFHIPNMGGKIIRSLLDFFAETHNSDVVSDLLQEVQIEPLYFELASSPLSGKIIVFTGS
LQKITRDEAKRQAENLGAKVASSVSKKTNLVVAGEAAGSKLSKAKELDISIIDEDRWHRI
VENDGQDSIKI
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcggatattgaccttttttcttatctgaatcctgaaaaacaggacttgccagct
ctggctccgaaagatttatctcgtgaacaagcggttattgaattggaacgcttggcaaat
ttgatcagccattacgatcatctttatcatgataaagataatccggctgttcctgatagc
gaatatgatgccttggtcttgcgaaaccgtcggattgaacagtttttccctgacttaatc
cggccggattctccaagtaaaaaagtcggtagtcgtcctaattcacgtttgcccaaaatt
gcacatcgggcagcgatgcttagtcttgataatggttttctggatcaggatgttgaagat
tttttgggtcgggtccgccgttttttcaatttaaaagaaaatcaggctgtcatttgcact
gttgaaccgaaaattgacggtctctcttgctctttgcgttatgaaaagggcattttaact
caggccgttacgcgaggagatggggttattggtgaggatgttacgcctaatgtccgcgtt
attgatgacatccccaaaacattaaaaggcgataattggccagaaattattgaaattcgt
ggcgaagtttacatggcaaaaagcgattttgctgctttgaatgctcgtcagacagaagaa
aataaaaagctttttgccaatcctcgcaatgctgcggctgggtctttgcggcagctagac
ccgaatattaccgcaagacgttctcttcgctttttggcgcatggttggggcgaggctaca
tctctacctgccgatacccaatacggcatgatgaaagtgatagaaagctatggcttatct
gtcagtaatctgctggctcgcgctgacaatattgggcagatgctcgatttctatcagaaa
atagaggccgaacgggctgatttagattttgatattgatggtgtcgtttataaattagat
cagctcgattggcagcaaagatttggattttcagcgcgcgccccacgttttgccttggcg
cataaattcccagcagaaaaagcacaaacaacgcttttagatatcgagatacaggttggg
cgtacgggcgttttgacacctgtggctaaattagagcctgtaacagttggaggggtcgtt
gtctcttctgcgaccctccataactctgatgaaattgagcgtttgggtgtccgtccggaa
gatcgggttctggttcaacgtgctggagatgttattccccagatagtcgaaaatttaacc
cctgatgtcgatcgtccgatttggcatttcccgcatcgctgtccagtttgtgactctgtt
gctagaagggaagaaggggaagtcgcctggcgttgcaccggaggtttgatctgtccagcg
caacgcgttgagcgcttgtgccatttcgtttcgcgcactgcctttgaaattgatggctta
ggtaaaagccatatcgaaagtttttttgccgataaattgattgaaacacctgctgatatt
tttcggttgtttcaaaaacgtcagcttttgatcgagagggaaggttggggtgaactttct
gtcgataatttaatatcggctatcgacaaacggcgaaaagtcccgtttgatcgttttctt
tttgccttgggtattcgccatgtaggtgctgtaacagcgcgagatttagctaaatcttat
caaacatgggataattttaaagcggccattgatgaggcggctcatctacggactatatta
cagccttcaagtgaagagtctgaagaaaagtatcaaaaaagggtagataaagagcttatc
tcttttttccatattcctaatatgggtggtaaaatcattcgaagccttctggattttttt
gctgaaacccataattccgatgttgtttctgatcttttacaggaagttcaaattgagcct
ctttattttgagttggcctcttcgcctttgtcaggaaagattattgtttttactggaagt
ctgcaaaaaataacgagagatgaggctaagcgacaagctgaaaatctgggtgctaaagtg
gcttcatccgtttcaaaaaagactaatcttgttgtcgcgggagaggccgcaggttctaag
ctttcaaaagcgaaagagctggatatttccattatagatgaggatagatggcatcgtatc
gtagaaaatgacgggcaagacagtataaaaatctaa
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