Zootermopsis nevadensis (dampwood termite): 110839219
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Entry
110839219 CDS
T05136
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
zne
Zootermopsis nevadensis (dampwood termite)
Pathway
zne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110839219
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zne03041
]
110839219
Spliceosome [BR:
zne03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110839219
Complex C
U5 SnRNP specific factors
110839219
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
110839219
NCBI-ProteinID:
XP_021938883
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDADLYDEFGNYIGPELESDEEEEEGYGDREPEAQEYDDEGAEDQGEEMDTTPMAVVLHE
DKRYYPAALEVFGPEVETIVQEEDNQPLDKPLVAPIKKKKFQLKEQDLPETVYNMEFLAD
MMDNPNLIRNVALIGHLHHGKTTFVDCLIRQTHPGFRSTEERNLRYTDTLFTEQERGVGI
KAIPVTLVLPDVKNKSYLINVFDTPGHVNFSDEVTAAKRICDGVVLFVDAAEGVMLNTER
LLKHAVQEKLAITVCINKIDRLMLELKLPPQDAYYKLRHIVEEINGLLSLYSDEENPKIV
SPILGNVCFASSQYAVCFTLKSFANIYAQTYDGININEFSRRLWGDIYFNSKTRKFTKKS
PHGSAQRSFVEFILEPLYKIFAQVVGDVDTTLPAVLDELGIKLTKEEMKINIRPLLRLIC
NKFLGDFSGFVDMCVQHIPSPVDNARLKVQHIYTGPLDTDLAEHMCSCNPDGHLMVYSTK
MYPTEDCTFFQVLARVMSGTLHAGQEVRVLGENYTLADEEDSRILTVGRLWIYEARYKVE
VSRVPSGNWVLIEGIDQPIVKTSTITDLNISDELYIFQPLKFNTQSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPLLATRVEESGEHVVLGTGELYLDCVMHDLRKMYSEIDIKVADPVV
AFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQISWNKKRLGEFFQT
KYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKGLLSSVKDSIVQGFQWGTREGPLC
EEPIRNVKFKILDAVIAMEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYLFVEVQAPA
DCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFCLSV
FHHWQIVPGDPLDKSIVIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFFDDPMLLE
LARQDVMLNYPL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgacttgtatgatgagtttggaaattacataggaccagagttagagtcagat
gaagaagaagaagaaggatatggagaccgagagcctgaggctcaggaatatgatgatgag
ggggcagaagaccagggagaagagatggatacaacaccgatggctgtggtattacatgag
gacaagcgatattatccagcagcactagaggtgtttggtccagaggtggaaaccattgtt
caagaagaggacaatcaacctctggacaagcccttggttgcacccataaagaagaagaag
tttcaactgaaggaacaggaccttccagaaactgtttataacatggagtttctcgctgac
atgatggacaatcccaaccttatccgcaatgtggcactcataggtcacctacatcatgga
aagaccacatttgttgactgcttgatccgccagacccatcctgggtttcggtctacagag
gaacgcaatttacgctacactgacaccctcttcaccgagcaggaacgtggtgtcggcatt
aaggctattcctgtaactttggttttaccagatgttaaaaacaaatcatatctcatcaat
gtgtttgacacaccaggacacgtcaacttctcagatgaagtgacagctgcaaaacgtata
tgtgatggagtagtgctgtttgtggatgcagcagaaggtgtaatgctgaatacagaacga
cttttaaagcatgctgtgcaggagaagttggccatcacagtttgtatcaacaagatagat
cgactaatgttggaactgaagctgccacctcaggatgcgtactacaaactgcgacatatt
gtcgaagaaatcaacggcttactaagtttgtactctgatgaagagaatccaaagattgtt
tctccaatcctgggtaatgtgtgctttgcaagttcccaatatgcggtatgcttcaccctc
aagtcctttgctaatatttatgcccaaacctacgatggaattaacatcaatgaattttct
cgccgactatggggagatatttacttcaacagcaaaacgcgcaaattcacaaaaaagtca
ccacatggttctgcacagaggagttttgtagaattcattctggaacctctatacaaaata
tttgcacaggtagttggagatgtggacacaactcttcctgcagtgctagatgaactggga
atcaaactgactaaagaggagatgaagatcaacattcgtcccctcttaaggctcatctgt
aacaagttccttggagactttagtgggtttgtggacatgtgtgtacaacacatcccctct
cctgttgacaacgccaggctaaaggtgcagcacatttatactggacctcttgatacggac
ttggctgaacacatgtgcagctgtaatcctgatggtcatctgatggtatatagtactaaa
atgtacccaacagaagactgcacattctttcaagtgttggcaagagtcatgagtggtacc
ctgcatgcaggacaggaagtgagggtgctgggggagaactacaccctcgctgatgaagag
gactcgaggatcctcactgttggcaggctgtggatttatgaagctaggtacaaggtggag
gtgagccgcgtgccttctgggaattgggtgctaattgaaggcattgatcagccaattgtg
aagacatccactatcactgatctcaatatttcagatgaattatacatatttcagccactc
aagttcaacacacaatctgtcattaaaattgcagtggagccagtaaacccatcagagtta
cccaagatgttggatgggttgcgtaaagtgaacaagtcatacccactactagccactagg
gttgaagagtctggagagcacgttgttcttggaacaggggaattgtacttagactgtgtg
atgcatgacctccgaaagatgtactctgagattgatatcaaagttgcagacccagtggta
gcattctgtgagactgtagtagagacgtcatcacttaaatgttttgctgaaacacccaat
aagaagaacaagatcacaatgattgctgagccacttgaaaaaggacttgcagaagatatt
gaaaatgaagttgtccagatatcatggaacaagaaacgtttaggggagttcttccagaca
aagtatgattgggatctgcttgcagctcgttcaatttgggcctttggtcctgattcaaca
ggcccaaacatccttgtggatgacacattaccttcagaggtagacaaaggattgttgagt
tctgtaaaggactcaattgttcaaggtttccagtggggtactcgggaaggacccttgtgt
gaggaaccaatcagaaatgtcaaattcaagattctggatgctgtaatagcaatggaaccc
ttgcatcgtggtggaggtcagataatacccacagcacggcgtgttgcttactcagcattc
cttatggctacaccacgcctgatggaaccatatctttttgtggaggtgcaagcaccagct
gattgtgtgtctgctgtttatacagtacttgccaaacgacgaggccatgtgacacaagat
gcaccagttcctggctcacccctttataccatcaaagccttcatcccagcaattgattca
tttggctttgagacagatttgaggacccacacacaaggacaggcattctgtttatcagtg
tttcaccattggcagattgttcctggtgatcctttggataaaagcattgttatacgtccc
cttgagccacagcctgcaactcatcttgctcgtgagttcatgatcaagactcgtcgtcgt
aaaggcctgagtgaagatgtgtctatcaacaagttctttgatgatcctatgttgcttgaa
cttgctagacaggatgtcatgctgaattatcctctgtaa
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