KEGG   Zingiber officinale (ginger): 121982236
Entry
121982236         CDS       T08725                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RKP isoform X1
  KO
K12169  Kip1 ubiquitination-promoting complex protein 1 [EC:2.3.2.27]
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zof04121]
    121982236
Enzymes [BR:zof01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     121982236
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    121982236
  Multi subunit type E3
   KPC complex
    121982236
SSDB
Motif
Pfam: RKP_N SPRY zf-C3HC4_3 Ufd2P_core
Other DBs
NCBI-GeneID: 121982236
NCBI-ProteinID: XP_042391138
LinkDB
Position
5A:145561417..145611923
AA seq 1281 aa
MEEDSNIRFTGISSGLAVLLSDNKPKGSPQKSRLISYCDGIGDHSVEQTLEHIFDLPHKS
VRSTSLIDINFIRSISRSQIPRFQLENAVDRHRDGLSIINCGSSTSTVVIDSSSVCGDMK
TIRNPLIVESQTVFSSARANACVWKGKWMYEVTLETSGIQQLGWAIIPCSFTDQKGVGDS
DDSYAYDGRRVNKWNKDPVSYGQSWVVGDVIGCCIDLDNDEISFFRNGVSLGVAFDRIQK
MNPENGYYPAISLSDGECCDLNFGARPFKYPISGFLPFQAPPNSRDYANYLLSCLTRLLE
VQCLDKPGSAYFEKLRRLKRFAPLKELFYPISHGIMEELFDVVNSSEGSFEYFAWGAIPS
FFLGIFGVQEAHDCASLDQVLELFLEFPGSDSLLQHLIRALSYGCKVAPLVLTECPYSGS
YPYLALVCYILRHRAMMVLWWKSPDFEFSFEGFLSLKRPNKQDLHCLIPSVWWPGSCEDV
GCESSMMLTMTALSTAIDKIEEKHRELCSLVIQFVPPAIPKELPGSVFRAFLQGFILKVR
GIQNKMTTSVVSNNSVVVSLYTVILHFLSEGFKVEGLSGSLKGIGLNLESDVGFLHRAGK
RRFPLELFFVGDGNCAGVRRIGGGFSNHLFNSQFSEEKAKVVQWDEGGMDDDDTRITHST
MKKPCCCSNSVNDVETSKHGIMLTSGGFKGLCSPVPVRSTQVVAMNSSNPDAGIVDKPST
SNQSEAYSGCGSLQYSESRTSFIEHTLDVLREEELLHTKLLLYHLGVASNFRQAFYYMSH
QSQSISLLDDTDKQIREKSCIEQVKRLKEARNAYREELVDCVRQCAWYRISLFSRWKQRG
MYATCMWVVELLLVLSNSDTCFCYVPEFYLESLVDTFHALRKSDPPFVASAIFLKQGLAS
FVTFVVRHFNDPRILSADIKDLLLHSISSLVQCKDYLIAFENNKEAIHSLPKALLLAFDN
RSWIPVTNIILRLCKGSGFGASKHLESSSSAHFQVLLREACCSDETLFSSFLNRLFNTLS
WTMTEFSVSIREMQENCQVGDLQQRRCGVVFDLSCSLARLLEFCTREIPQVFLLGPDMNL
RRLIELIIFILNHIISASDAEFFDMSVRRPSQYQEKTNRTMILAPLVGIITSLMDAHSDS
EHKDLNDVVGVFANMDCPATVFQCLLGYNWTTVLRGDASPSKLRKLEEFSSNLRSRTETI
EHGVIGDYEEENCCCICYSCDSDSMFEPCHHMSCHGCITRHLLNGQRCFFCNAVVTNVVK
LKPRLGSRGVGAEPWSANRDS
NT seq 3846 nt   +upstreamnt  +downstreamnt
atggaagaagatagtaatattaggttcacaggaatttcctcaggtttggctgttctacta
tctgataataaacccaagggtagtccccaaaagtcccggttgatttcttattgtgatggc
attggtgatcattcggtcgagcagacgcttgagcatatatttgatcttcctcacaagtca
gtccgttctactagtctaatagacatcaatttcatcagatcaatctcgaggagccaaatt
ccaagatttcagctggaaaatgctgttgatcgacatagagatggtctatccattattaac
tgcggttcatctacaagcactgttgtcatagatagttctagtgtatgcggagatatgaag
accataaggaatccattaattgtagagagccagacagtgttcagtagtgcccgagctaat
gcctgtgtatggaagggaaaatggatgtatgaagtgacattagaaacttctggaatccag
cagcttggatgggctattattccatgctccttcactgatcagaaaggtgtcggcgattca
gatgattcctatgcatatgatggtaggagagttaacaaatggaacaaagatccagtgtca
tatggtcaatcatgggtagtgggtgatgtcattggctgttgtatagacttggacaatgat
gagatttcctttttcagaaatggtgtttctcttggagttgcatttgataggatacagaaa
atgaatcctgagaatggctattatcctgcaatatccctttctgatggtgaatgttgtgat
ctgaatttcggtgctcgtccgttcaaataccctatctctgggtttcttcctttccaggct
cctccaaactccagagattatgctaattatttgctcagttgcttgactagattattggaa
gtacaatgtttagataaacctggttcagcatattttgagaagttgaggaggttaaagagg
tttgcaccacttaaagaactgttttatcccatatctcatggtataatggaggagttattt
gatgtagttaattcaagcgaagggagctttgaatattttgcatggggtgcaattccgtca
ttttttttaggtatatttggtgttcaggaagctcatgattgtgcaagtttggatcaggtt
ctcgaattatttctagagtttcctgggtctgattcactgctgcagcatctaattagggca
ctttcatatggttgcaaagtggccccacttgtactgacagagtgcccttattctggatca
tacccatatctagcactggtgtgttatattctcagacacagagctatgatggttctttgg
tggaagtcaccggattttgaattctcatttgaagggtttctttcactaaagagaccaaac
aagcaggatcttcattgcctcattccatctgtttggtggcctggttcatgtgaggatgtg
ggttgtgaaagtagcatgatgcttactatgacggcattgtccactgctattgataagatt
gaggagaagcacagggaactttgtagtttggtcattcagtttgtgcctccagcaatcccc
aaggagttacctggatctgtgttcagagcattcttacagggattcattctgaaggtcaga
ggtatccagaacaagatgacaacttctgttgtttcaaataactcagtagttgtttctctg
tacacagtaatcttacatttcctatctgaaggttttaaagtggagggtttatctggttca
ttgaaaggcattggattgaatctagagtctgatgttggatttcttcacagagctgggaag
agaaggtttccacttgagttgttttttgttggtgatggaaactgtgccggagttcgtaga
ataggcggtggcttttccaatcacctatttaactctcaatttagcgaggaaaaagctaaa
gtagtacaatgggatgaagggggcatggatgacgatgacacaaggataacacattctaca
atgaagaagccatgctgctgttcaaattctgttaatgatgttgaaacatcaaaacatggc
attatgctcacatctggaggtttcaaaggtctttgttctcctgttccggtgagatcaaca
caagtagtagccatgaactccagcaaccctgatgctggaattgtggataagcctagtaca
agcaatcaatcagaagcctattctggatgtggatctttgcagtattcagaaagtagaaca
tcattcattgaacataccttagatgtattgagagaggaagagctgctccatacgaagcta
ttgctgtaccatttaggtgttgcctcaaattttaggcaggcattttattacatgtctcat
caatcacaatccatctctctcttagatgatacagataaacaaataagagaaaaatcctgc
attgagcaggtgaagcgtttgaaagaagctcgtaatgcttatcgtgaagaattggttgat
tgtgtcaggcaatgtgcatggtatcgtatctctctattctctcgctggaagcaaagagga
atgtatgcaacatgcatgtgggttgtggagctgctcttggttctaagcaatagtgatact
tgtttttgctacgttcctgagttttatcttgagtcactggttgatacttttcatgcatta
cggaaaagtgatcctccatttgttgcttctgctatttttctcaagcaaggccttgcttca
tttgtcacatttgttgtcagacactttaatgatccacggattctaagtgctgacattaaa
gatcttctcctccactcaatatcatcattggtgcaatgcaaggattacctgatagctttt
gaaaacaataaggaagcaattcatagcttgcccaaggcattgttattggcatttgataat
aggtcctggataccagttacaaatatcattctcaggttatgtaagggttctggatttggt
gcatcaaagcatcttgaatcttcatcatcagcccattttcaggtattacttcgagaggct
tgctgcagtgatgaaactctattttcttcatttctgaatcgtctttttaacacactaagc
tggaccatgactgaattctcagtgtctatccgagagatgcaagagaactgtcaggttggt
gatttgcagcaaagaagatgcggtgttgtttttgatctgtcatgcagtcttgcaaggctt
ctggaattttgtacgagggagattccccaggtttttcttttggggcctgatatgaattta
cgacgacttatagagttgatcatttttattctgaaccacataatttcagcatctgatgct
gaattctttgacatgtctgtcaggcgacctagtcaatatcaagagaagacaaatcgaact
atgatcttagcacctcttgttggtattataactagcctaatggatgctcattctgattca
gaacacaaggatctgaatgatgtcgttggagtgtttgcaaacatggattgtcctgctaca
gtttttcaatgcttgctaggctacaattggactactgttctgagaggggacgcctctcct
tcaaagttaaggaaactcgaggaattttccagcaatctgagaagcagaacagagaccata
gaacatggagtaatcggtgactacgaagaggaaaactgctgctgcatttgttattcttgt
gattcagattctatgtttgagccgtgtcatcacatgtcttgccatggatgtatcacaaga
cacctattgaatggccaaaggtgcttcttttgtaatgcagtcgttaccaatgttgttaaa
ctgaaaccaagattaggaagccgaggagtcggagccgaaccatggtcagccaacagagat
tcatga

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