Zingiber officinale (ginger): 121985754
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Entry
121985754 CDS
T08725
Name
(RefSeq) RING-box protein 1a-like
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03420
Nucleotide excision repair
zof04120
Ubiquitin mediated proteolysis
zof04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121985754
04120 Ubiquitin mediated proteolysis
121985754
09124 Replication and repair
03420 Nucleotide excision repair
121985754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
121985754
03400 DNA repair and recombination proteins [BR:
zof03400
]
121985754
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
121985754
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
121985754
Multi subunit type E3
SCF complex
Ring finger protein
121985754
Cul2 complex
121985754
Cul3 complex
121985754
Cul4 complex
121985754
Cul7 complex
121985754
Cul8 complex
121985754
Cul9 complex
121985754
DNA repair and recombination proteins [BR:
zof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
121985754
TCR (transcription coupled repair) factors
Cul4-CSA complex
121985754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
121985754
NCBI-ProteinID:
XP_042395311
LinkDB
All DBs
Position
5B:123291220..123295541
Genome browser
AA seq
125 aa
AA seq
DB search
MASLDTDVDMVQGGEGSIVADVVSPSSIASSSSKKPKRFEIKKWNAVALWAWDIVVDNCA
ICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEF
QKYGH
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcttgataccgacgtcgacatggttcaaggcggtgaaggttcaatcgtcgcc
gacgttgtgtcgccgtcttccatcgcttcatcctctagtaaaaagccaaagaggttcgag
attaagaaatggaacgctgtcgccctctgggcctgggatatcgtggtggacaactgcgct
atttgtaggaatcacatcatggatctctgcatcgagtgtcaggctaaccaggcaagtgcg
actagtgaagagtgcacagtggcttggggggtttgcaatcatgccttccatttccattgc
atcagccgttggctcaaaactcgtcaagtctgccccttggacaacagtgagtgggagttc
cagaaatatggccactag
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