KEGG   Zingiber officinale (ginger): 122004643
Entry
122004643         CDS       T08725                                 
Name
(RefSeq) transcription factor PIF1-like
  KO
K16189  phytochrome-interacting factor
Organism
zof  Zingiber officinale (ginger)
Pathway
zof04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:zof00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    122004643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:zof03000]
    122004643
Transcription factors [BR:zof03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   HLH domain only
    122004643
SSDB
Motif
Pfam: HLH bHLH_SAC51 bHLH_IRO3 bHLH_LHW Tom22 Rib_mS39_PPR
Other DBs
NCBI-GeneID: 122004643
NCBI-ProteinID: XP_042415430
LinkDB
Position
7B:complement(105551702..105553515)
AA seq 448 aa
MSQFVPDWNLEDGFTNSEDVHILPMTSQKNPMGRDSEIAELLWRDGHMVVGSQTDQEGSG
RGSEFQVIRRHELSTSLIQDEETASWIQNSLDHSMGKEFCSEFFSEMAGSNSKSLDKLNS
NAIVGNARCVTANGFEFTSYKQQDLKRSVSRVENCNALNFLHFSKSLRGKSDEEGSSGST
KVQRDESSTPMMKIGSSIHGSNQIPNDVIGNQCKQKQASETAILSTLPTSVFSTRSIGVQ
GESHPCLKRKQRDTDYSKDQSEETEESLNAKKQSRNRAAEVHNLSERRRRERINERMKAL
QELLPHCNKTDKASMLEEAIEYLKSLQLQVQMMWMGSGMAQMMFPGEQQYISGMEMGMGM
AHASVPSMHHAVHLPSLPVVGHQSVNQAFLCPTASFHAVNLGDTTQSAHLQGSQVSFDGF
RLHSQARDESVCLWIEGGAGESANNSTE
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgagccagtttgttcctgattggaatttagaagatggcttcacaaatagtgaggatgtt
catattcttccaatgacaagtcaaaagaacccaatggggcgagacagcgagatcgcagag
ttgctatggcgagatgggcatatggttgtgggtagccaaactgatcaggaaggttctggt
agaggtagtgagtttcaagtgatacgacgacatgagctatccaccagcttgattcaggat
gaagaaactgcatcgtggattcaaaactctcttgatcattcgatgggaaaagaattctgt
tcggagttcttttctgaaatggcaggtagcaactcaaaaagcttagacaagttgaatagc
aatgccatcgttgggaatgcaagatgtgtaactgccaacggttttgaattcacctcctac
aagcaacaagatttgaaacgatcagtttcccgcgtagaaaattgtaatgctctaaacttc
ttacatttttcgaagtcattgagaggcaaatcggatgaggaaggatctagtggctcgact
aaggtccagcgagacgagtcttcgaccccaatgatgaaaattggatcaagcattcatgga
agtaatcaaattcccaacgatgtcatcggtaatcaatgcaagcaaaaacaagcaagtgaa
actgctattctttcaacattaccgacttcggtttttagtactagaagcataggagtccag
ggtgaaagtcatccatgcctaaagaggaagcaaagggatactgattattcaaaagatcaa
agtgaggagacagaggagtcactgaatgcaaagaagcaaagcagaaaccgcgcagctgaa
gtccacaatctatctgagaggagaagacgagagaggataaacgaaagaatgaaggcactc
caagaactactacctcattgcaataaaacagacaaagcatcaatgcttgaagaggcaatt
gaatacttgaagtcactccaactgcaagtgcagatgatgtggatgggaagtggcatggca
cagatgatgtttcccggcgagcaacaatatatttccggcatggagatggggatggggatg
gctcatgcttcagttccttcaatgcatcatgcagttcatctaccaagtcttccagttgtt
ggtcatcaatctgtaaaccaggcatttttatgtcctactgcatcttttcatgcagtaaat
ctcggagacacaacacaaagtgcccatttgcagggatcgcaggtctcattcgatggcttt
cgattgcattcgcaggctcgagatgaatctgtatgcctttggatcgaaggtggagcagga
gaatccgcgaacaacagcaccgagtag

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