Zingiber officinale (ginger): 122007002
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Entry
122007002 CDS
T08725
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic-like
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00906
Carotenoid biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
Module
zof_M01040
Lutein biosynthesis, plants, lycopene => lutein
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
122007002
Enzymes [BR:
zof01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
122007002
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Paralog
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Motif
Pfam:
Lycopene_cycl
DAO
HI0933_like
Pyr_redox_2
FAD_binding_2
GIDA
Thi4
NAD_binding_8
Pyr_redox_3
FAD_binding_3
Lys_Orn_oxgnase
Motif
Other DBs
NCBI-GeneID:
122007002
NCBI-ProteinID:
XP_042418671
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Position
7B:complement(114300148..114325102)
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AA seq
540 aa
AA seq
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MECFSRASTAAISVHPDEWIFRRRRIPVTGQKLLRSQRRRSLALLRVRAVVGGGADSCVA
TRDEVSGVEEFADEEDFVKAGGSERLFVRMQETKQMERQSKIADKLLPISAEGSTLDLII
IGCGPAGLSLAAESAKKGLQVGLIGPDLPFTNNYGVWEDEFKDLGLESCIEHVWRDTIVY
LDSNEPIFIGRPYGRVSRHLLHEALLRRCHEYGVMYLNSKVEKIIEGSNGCSIVVCEKNY
MITCRLTTVASGAASGKLLEYDVGGPRVSVQTAYGVEVEVENNPYDPDLMVFMDYRDYMK
EKQRCPEAEYPTFLYAMPMSPTRVFFEETCLASRNAMPFDLLKKKLMSRLDTMGVKVLKV
YEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPNYASAIAAILKKD
IFCEKNSMMQTYRSPSMLAWKVLWPQERKRQRSFFLFGLALIIELDIEGIRTFFQTFFRL
PNWMWQGFLGSTLSSVDLIWFAFYMFVLAPNSMRMCLVRHLLSDPTGATMLKTYLAYSQN
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggagtgcttcagtcgcgcgagcaccgctgcaatatccgtacatcctgatgagtggatt
tttcgaaggcggaggattccagttacggggcagaagcttcttcgaagccagcggcgccgg
tcgctggccttgctcagggtgcgggccgtagttggaggcggcgcggacagctgcgtcgcc
accagggacgaggtctctggagtggaagagtttgcggacgaggaggatttcgttaaggcg
ggagggagtgagcggctgtttgtccgaatgcaggaaactaaacaaatggagagacagagc
aagatcgcagataagctgttgcctatatctgctgagggttctacattggatttaataata
attggctgtggtccagctggtctttctcttgctgcagaatcagctaaaaaaggattgcaa
gttggtctcattggaccagatcttccatttaccaataattatggtgtgtgggaagatgag
tttaaggatcttggcttagagagctgcattgagcatgtctggcgtgatacaattgtctat
cttgatagtaatgaaccaattttcattggtcgtccatatggtagggttagccgacattta
ttgcatgaagcattgctgagaaggtgtcatgaatatggagtcatgtacctcaattcaaaa
gtggaaaaaattattgaaggaagcaatggatgtagcatagttgtttgtgaaaagaattat
atgattacttgcaggctcactactgttgcttctggagctgcatcaggaaaacttctcgag
tatgatgtaggaggtcctcgtgtttcagtgcaaacagcatatggagttgaagtggaggtg
gaaaacaacccatatgatcccgacttaatggttttcatggactacagagactatatgaag
gaaaaacaaagatgtcctgaggcagagtatccaacatttctctatgccatgcccatgtca
cctacaagggtcttttttgaggaaacatgtttagcatcaagaaatgctatgccttttgat
cttctaaagaagaaactaatgtctcgtttggacactatgggtgttaaagtgctgaaagta
tatgaagaggaatggtcatatattcctgttggcgggtcattaccaaacacagaacagaag
aaccttgcatttggtgctgcagctagcatggtgcatccagctacaggatattcggtcgtc
cggtccctttcagaagctccaaattatgcatctgcgatagcagctatattgaagaaagat
atattttgtgaaaagaactcaatgatgcaaacatatcgtagtccctcgatgcttgcatgg
aaagttctttggccacaagaaagaaaaaggcaaaggtcattctttctttttgggctagca
ctgataatagaacttgatatcgagggaatcaggactttcttccaaacattcttccgttta
ccaaattggatgtggcaaggctttctcggatcgacactttcatctgtggacctgatatgg
tttgccttctacatgtttgtgttagccccaaacagcatgagaatgtgccttgtgaggcat
ttgctgtctgatccaacaggagcaacaatgctgaaaacatatcttgcatattctcaaaac
tag
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