Zingiber officinale (ginger): 122008024
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Entry
122008024 CDS
T08725
Name
(RefSeq) transcription factor UNE10-like
KO
K16189
phytochrome-interacting factor
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122008024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122008024
Transcription factors [BR:
zof03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
122008024
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Motif
Pfam:
HLH
bHLH_SAC51
bHLH_IRO3
bHLH_LHW
POX
COLEC12
FTR1_4HB
Motif
Other DBs
NCBI-GeneID:
122008024
NCBI-ProteinID:
XP_042419534
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Position
8A:24369027..24372131
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AA seq
448 aa
AA seq
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MSQCVPSWEVDDPPPPPPSALHSACVGDAGLCGGELGMDYEIAELTWKNSQLELHGLVPP
RRSPVASAAGSAEWSKNHRSGTLESVVNQSAAGGGGRRELASHELADWYGGEPRHPPGAA
VDAIVPCHDAVANSGGARKRARMTGVCSSQGSAVGSLATTLMTLDTWREEENDGGAAATA
TTTAYTAATATTTAFTATNSTSSETENTSFGGKRKVLGVYNHVSISHTSSDTSSDTKHDS
FCDEVEKTTKSEAEKASASTRKSRAAAVHNQSERKRRDKINQKMKTLQKLVPNASKTDKA
SMLDEVIEYLKQLQAQIQMMSKFNMMMPMAQAAAMPQLQMPVMTAHVPQMPQMGMGLGLM
DLASMSRPMPPPAFPLLNPSAFLPFMSAGGWDASGDHRRLAGVLPDPYTALMACQMAQQQ
PMSLDEYSRMAALFQQFYQQQPPSSAKQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagtgcgtgccgagttgggaggtcgatgacccgccgcctccgccgccttccgcc
cttcattcagcctgcgtcggcgacgccggcctctgtggcggggagctgggaatggactac
gagatcgccgagctgacgtggaagaacagccagctggagctccacggcctcgtcccgcct
cgtaggtccccagttgcctccgccgccggaagcgcggagtggagcaagaaccaccggagt
ggcacccttgagtcggtcgtgaatcagtccgccgccggcggaggcggccgccgcgagctg
gcaagccacgaattggcggactggtacggcggagagccgcgccaccccccgggggcggcg
gtcgacgcgatcgtcccctgccacgacgccgtcgccaacagcggcggcgcaaggaagcgg
gcgcgaatgacgggggtgtgctcgagccagggcagcgcggtggggtccctggccaccacg
ctgatgacgctggacacgtggagggaagaagagaacgacggcggcgcggctgccaccgca
accaccaccgcctatacggctgccaccgcaaccaccaccgcctttacggctaccaactcg
acctcgtcggagacggagaacacgagcttcggggggaagaggaaggtgctgggcgtctac
aaccacgtctccatcagccacaccagctccgacaccagctccgacaccaagcatgatagt
ttctgcgacgaagtagagaaaaccaccaaaagcgaggcggagaaagcttcagcctccacc
agaaaaagcagagccgccgccgtccacaaccagtccgaacgtaaaaggagggacaagatc
aatcaaaagatgaaaaccctacagaagctggtccctaatgcaagcaagaccgacaaagcg
tcgatgctggacgaggtgattgagtacttgaaacagctacaagctcagatccagatgatg
agcaagtttaacatgatgatgccgatggcccaggcggcagcgatgccgcagcttcaaatg
ccggtgatgactgcccacgtcccccaaatgcctcagatgggaatgggtttgggcctgatg
gacttagcttcgatgagtcgaccgatgcctccccccgcttttcccctcctcaatccgtcg
gcgttcctcccgttcatgtcggctgggggttgggacgcctccggagatcatcggcgtctc
gccggcgtcctccctgatccttacacggccctcatggcttgtcaaatggcacaacagcaa
ccaatgagtttggacgagtacagtaggatggctgcattgttccagcagttttatcagcag
caaccgccgtccagtgccaagcagtag
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