KEGG   Zingiber officinale (ginger): 122008024
Entry
122008024         CDS       T08725                                 
Name
(RefSeq) transcription factor UNE10-like
  KO
K16189  phytochrome-interacting factor
Organism
zof  Zingiber officinale (ginger)
Pathway
zof04075  Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:zof00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04075 Plant hormone signal transduction
    122008024
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:zof03000]
    122008024
Transcription factors [BR:zof03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   HLH domain only
    122008024
SSDB
Motif
Pfam: HLH bHLH_SAC51 bHLH_IRO3 bHLH_LHW POX COLEC12 FTR1_4HB
Other DBs
NCBI-GeneID: 122008024
NCBI-ProteinID: XP_042419534
LinkDB
Position
8A:24369027..24372131
AA seq 448 aa
MSQCVPSWEVDDPPPPPPSALHSACVGDAGLCGGELGMDYEIAELTWKNSQLELHGLVPP
RRSPVASAAGSAEWSKNHRSGTLESVVNQSAAGGGGRRELASHELADWYGGEPRHPPGAA
VDAIVPCHDAVANSGGARKRARMTGVCSSQGSAVGSLATTLMTLDTWREEENDGGAAATA
TTTAYTAATATTTAFTATNSTSSETENTSFGGKRKVLGVYNHVSISHTSSDTSSDTKHDS
FCDEVEKTTKSEAEKASASTRKSRAAAVHNQSERKRRDKINQKMKTLQKLVPNASKTDKA
SMLDEVIEYLKQLQAQIQMMSKFNMMMPMAQAAAMPQLQMPVMTAHVPQMPQMGMGLGLM
DLASMSRPMPPPAFPLLNPSAFLPFMSAGGWDASGDHRRLAGVLPDPYTALMACQMAQQQ
PMSLDEYSRMAALFQQFYQQQPPSSAKQ
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgagtcagtgcgtgccgagttgggaggtcgatgacccgccgcctccgccgccttccgcc
cttcattcagcctgcgtcggcgacgccggcctctgtggcggggagctgggaatggactac
gagatcgccgagctgacgtggaagaacagccagctggagctccacggcctcgtcccgcct
cgtaggtccccagttgcctccgccgccggaagcgcggagtggagcaagaaccaccggagt
ggcacccttgagtcggtcgtgaatcagtccgccgccggcggaggcggccgccgcgagctg
gcaagccacgaattggcggactggtacggcggagagccgcgccaccccccgggggcggcg
gtcgacgcgatcgtcccctgccacgacgccgtcgccaacagcggcggcgcaaggaagcgg
gcgcgaatgacgggggtgtgctcgagccagggcagcgcggtggggtccctggccaccacg
ctgatgacgctggacacgtggagggaagaagagaacgacggcggcgcggctgccaccgca
accaccaccgcctatacggctgccaccgcaaccaccaccgcctttacggctaccaactcg
acctcgtcggagacggagaacacgagcttcggggggaagaggaaggtgctgggcgtctac
aaccacgtctccatcagccacaccagctccgacaccagctccgacaccaagcatgatagt
ttctgcgacgaagtagagaaaaccaccaaaagcgaggcggagaaagcttcagcctccacc
agaaaaagcagagccgccgccgtccacaaccagtccgaacgtaaaaggagggacaagatc
aatcaaaagatgaaaaccctacagaagctggtccctaatgcaagcaagaccgacaaagcg
tcgatgctggacgaggtgattgagtacttgaaacagctacaagctcagatccagatgatg
agcaagtttaacatgatgatgccgatggcccaggcggcagcgatgccgcagcttcaaatg
ccggtgatgactgcccacgtcccccaaatgcctcagatgggaatgggtttgggcctgatg
gacttagcttcgatgagtcgaccgatgcctccccccgcttttcccctcctcaatccgtcg
gcgttcctcccgttcatgtcggctgggggttgggacgcctccggagatcatcggcgtctc
gccggcgtcctccctgatccttacacggccctcatggcttgtcaaatggcacaacagcaa
ccaatgagtttggacgagtacagtaggatggctgcattgttccagcagttttatcagcag
caaccgccgtccagtgccaagcagtag

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