KEGG   Zingiber officinale (ginger): 122010237
Entry
122010237         CDS       T08725                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03420  Nucleotide excision repair
zof04120  Ubiquitin mediated proteolysis
zof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122010237
   04120 Ubiquitin mediated proteolysis
    122010237
  09124 Replication and repair
   03420 Nucleotide excision repair
    122010237
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zof04121]
    122010237
   03400 DNA repair and recombination proteins [BR:zof03400]
    122010237
Enzymes [BR:zof01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     122010237
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   122010237
  Multi subunit type E3
   SCF complex
    Ring finger protein
     122010237
   Cul2 complex
     122010237
   Cul3 complex
     122010237
   Cul4 complex
     122010237
   Cul7 complex
     122010237
   Cul8 complex
     122010237
   Cul9 complex
     122010237
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      122010237
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      122010237
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-RING_11
Other DBs
NCBI-GeneID: 122010237
NCBI-ProteinID: XP_042422637
LinkDB
Position
8A:complement(129978206..130005871)
AA seq 202 aa
MTLPPYYGHLPIAHLAIMNALLSFSETLRVRSASHPFLQFPSGRGLGQHFGSSRETNVTR
CISPPPCCCRIPTLLRSMASIDTDVDMVPVGEGSSVGVAGSSSAAASSSSKKPKRFEIKK
WNAVSLWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISR
WLKTRQVCPLDNSEWEFQKYGH
NT seq 609 nt   +upstreamnt  +downstreamnt
atgaccctgccgccctactatggccacctcccgatcgcccatcttgccatcatgaatgcg
ttactaagtttttcagagactttaagggttcgatctgcctctcatccttttctccaattt
ccttcgggacgcgggttagggcagcacttcggttccagcagagagacaaacgtcacccgc
tgtatttctcctccgccgtgctgctgccgaatcccgaccctccttcgatccatggcttct
atcgacacggacgtcgacatggttccagtcggtgaaggttcaagcgtcggcgtcgcggga
tcgtcctccgccgccgcttcctcctcttcgaaaaagccgaagaggttcgagatcaagaag
tggaacgctgtctccctctgggcctgggatattgtggtggacaactgcgctatttgtagg
aatcacatcatggatctctgcatcgagtgccaggctaaccaggcgagtgcgactagtgag
gagtgcacagtggcttggggtgtctgcaatcatgccttccatttccactgtatcagccgt
tggcttaaaactcgccaagtctgccccttggacaacagcgaatgggagttccagaaatat
ggtcactag

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