Zingiber officinale (ginger): 122016048
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Entry
122016048 CDS
T08725
Name
(RefSeq) transcription factor EGL1-like
KO
K28363
basic helix-loop-helix transcription factor family protein
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zof03000
]
122016048
Transcription factors [BR:
zof03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
122016048
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Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH-MYC_N
bHLH-TF_ACT-like_plant
HLH
bHLH_IRO3
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
122016048
NCBI-ProteinID:
XP_042429130
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Position
8B:complement(101517291..101520606)
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AA seq
645 aa
AA seq
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MCRAMDTDAQIHEEDSREQHLRKQLAAAVRKIGWSYAIYWSISSHQPGVLAWTDGFYNGE
IKTRKTTQPTELNSDHIGLQRSEELRELYESLSAGDSNLHNRRPCASLSPEDLTDTEWYY
LVCMSFTFTIGQGLPGKAFANDQYVWLNHAQFADCKIFSRSLLAMSASIQTVLCIPFMDG
VLEFGTTELVLEDPAFATQTTNVFWELPVPVCSEQSISTPEMAEMAATDQVIQNQNLGDD
LDNSMVLEDENLVIESSNPLEIHPVHFPFALQSYATTKDEAEKLHFDICEELNISSPGDG
SNECFRTQQLEDLLELNGLNCLHGSLNSNEQESLSIVDAQQLLSSTNKVQVGNDIHYVRT
LTRILCNSKQVKSMPCFSKVSHKSSFIVWSRGLSSAKPFNGTPQKLLKKIIIDGEWLLNG
SILNCQEQNGLPGNLLKKGQPRTTSVLSERRRREKLNEKFVLLQSLVPSISKVDKASILG
DTIDYLKDLEKRVQELESCRKSSEDLDTEDRSKHPDDVAERTSDNYGNKEITIVGRKRSA
HKRKADLLEAEGEHHWVLSKEGPIDVNVTFNKKEVAVVMHCPWRECLLLEIVESIGNFHL
DPVSMQSSIVEGALALTIKCKLRSTSEASPGMIKRALQRVIGKCL
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcgagcaatggacacagatgctcagattcatgaagaagattcaagagagcagcac
ctccggaagcagcttgctgctgctgtgaggaagattgggtggagttatgcaatctattgg
tccatctccagccaccagccaggggttttggcatggactgatgggttctataatggtgaa
atcaagacaaggaagactacacaacccacagaactgaattcagatcatattggcctccag
aggagtgaagagttgagagaattgtatgaatcactttcagcaggtgatagcaatcttcac
aatagaaggccttgtgcttcattgtcgccggaggatctcaccgataccgagtggtattac
ttggtttgcatgtccttcaccttcactatagggcaaggattgcctggtaaagcgtttgcg
aacgatcagtatgtgtggttgaaccatgctcagtttgccgattgcaagattttttcgcgc
tctctacttgcaatgagcgcatctatacagactgtgttgtgtatccctttcatggatggt
gtgctggagtttggtacaactgaattggttttggaggatccagcttttgctacgcaaacc
acaaatgtcttttgggagctaccggttccagtttgctctgaacaatctatatccactcct
gaaatggctgaaatggccgctaccgatcaagttattcaaaatcaaaatctcggtgacgat
ttagacaattctatggttttggaggatgaaaatttggtcatagaaagctcaaatccactg
gagattcatccggtgcattttccttttgctcttcagtcgtatgccactacaaaggatgag
gctgagaaactgcattttgatatctgtgaagaactgaatatcagttctcccggtgatggc
tcgaatgagtgctttcgaactcaacagctcgaggatctgctcgaactgaatgggctaaat
tgccttcatggttctctaaactcaaatgagcaagaatcattgtccattgttgatgctcaa
cagcttctttcttcgaccaataaggtccaagttggcaacgacatacactatgtgaggact
cttactaggattctatgcaactctaaacaggtaaaatcaatgccatgcttctcaaaggtc
tctcacaaatcaagttttatcgtctggagtagaggtttgagcagcgcaaaaccattcaat
ggcacaccacaaaagctgctgaagaagattataattgatggagaatggttactcaatggc
agcattctaaattgccaagaacaaaatggtttaccggggaatctattgaagaaaggacag
ccacgcacaaccagtgttttgtcggagagaaggagaagggagaaattgaacgagaaattc
gtgcttttgcaatcgttggttccttccattagcaaggttgacaaggcatctatccttggc
gacacaattgattacctgaaagatcttgagaaaagagtgcaagagctagaatcgtgccgg
aagtcatcagaggatcttgacactgaagacagaagtaagcatcctgatgatgtagcagaa
agaacatctgacaactatggcaacaaagagatcaccattgttggcaggaagcggtcggcg
cacaagcgtaaagctgacctcctcgaagcagaaggggagcaccactgggtgctatccaaa
gaaggccctatcgatgtcaatgttaccttcaacaaaaaggaggttgcagtggtgatgcat
tgcccctggagggaatgcctgttgcttgagatcgtcgaatctataggcaatttccacttg
gatcctgtctcgatgcagtcctcgatcgtcgagggtgcgcttgctttgacgatcaaatgc
aagctcaggagcaccagtgaggcctcaccagggatgataaagagagcactgcagagagta
ataggtaaatgcctgtaa
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