Zingiber officinale (ginger): 122021094
Help
Entry
122021094 CDS
T08725
Name
(RefSeq) sphingosine kinase 2-like isoform X1
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00600
Sphingolipid metabolism
zof01100
Metabolic pathways
zof04148
Efferocytosis
Module
zof_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
122021094
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122021094
Enzymes [BR:
zof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
122021094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAGK_cat
YegS_C
CERK_C
Motif
Other DBs
NCBI-GeneID:
122021094
NCBI-ProteinID:
XP_042435111
LinkDB
All DBs
Position
9A:37807037..37821305
Genome browser
AA seq
500 aa
AA seq
DB search
MEKDLAAPSLAEKVRIDGSVAEATLAPDGALRWSSDNGGKWCLTFDSEVLGFETEGARIT
IRAFVEASKGTASCGSQGGLGRRVRRDYVLDMPTEEAASMWTEKMNAYLDSLGRPKRLFI
ILNPYGGKKGALRIFNTEIKPLLVDANVLYTMKETKHQLHAQEIAKTMDLLKYDGIVCVS
GDGVLVEVVNGLLQREDWDSAIQIPLGIIPAGTGNGMAKSLLHSVGDLYSVSNATFSVIR
GYRRPLDVVSVAQGKTKFFCVLMLTWGLVADIDIESEKYRWMGSARLDFYSLLRILKLRK
YHGHIQFVPAPGYETYGEPITQSFCSSGTEFCKDDQGDTVTASSCGYQGLAMGAYGCEWR
CMNGPFIAVSINNVPWAAEDVMPAPNAKFSDGYLDAIIIRDCPKSVLLSLMLQMSDGSYC
KSPYVTYFKVKGFRLEPGNRVGNPSKGGIVDSDGEVIARGDYSDCNSGKQEKEHNNLMAY
GPPIEMAVDKGLATIFSPRC
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggatctcgccgctccttcgctggcggagaaggtgcggatcgatgggtcagtg
gcggaggcaaccctagcgcccgacggggcgctgcgctggagctccgacaacggcggaaag
tggtgcctcaccttcgattccgaggttctagggttcgaaacggagggtgctcggatcacc
atccgggcattcgtggaggcgtccaaggggacggcttcctgtggctctcaggggggcctc
gggaggcgggtgaggagggattatgttctcgatatgcccaccgaagaggcggcttccatg
tggacggagaagatgaacgcttatctcgattctctgggacggccaaagcggttgtttatt
attttaaatccatatggaggaaagaaaggtgcactgagaattttcaatacagagattaag
ccccttctagtggatgctaatgtcctttacaccatgaaagaaactaaacatcagctccat
gctcaagaaattgctaagaccatggatcttctaaaatatgacggaattgtgtgtgtcagt
ggtgatggtgtactcgtggaggtagttaatggtttacttcaaagggaagactgggatagt
gccattcaaattcctcttgggataattccagcagggacaggaaatggtatggcaaaatca
cttctacattctgtaggcgatttatactccgtttcaaatgccacattttctgttattaga
ggttacagacgtcctcttgatgtggtttctgtcgcacaaggaaagactaaatttttctgt
gtcttgatgcttacttggggcttggtagctgatattgatattgaatcggaaaagtacagg
tggatgggaagtgctcgcttggacttttattctctcttacgcatattgaaactgcgaaag
tatcacgggcatattcagtttgtgccagcacctggatacgaaacatacggagaaccaata
acgcaaagcttttgcagcagtggcactgaattttgcaaagatgaccagggagatacagta
actgccagctcgtgtggctaccaaggcctagcaatgggcgcctatggatgtgaatggaga
tgtatgaatggtcctttcattgctgtttcgatcaacaatgtaccatgggcagctgaagat
gtgatgccagcaccaaatgccaagttctctgatggctacttggatgccataatcatcaga
gattgtccaaagtcagtcctcttgtcgctgatgctacagatgagcgatggaagttactgc
aagtcgccatatgtcacgtacttcaaggtcaagggatttcggttagaaccaggaaacaga
gtaggcaatccctcaaagggtggcattgtcgactcggatggagaggttattgcaagggga
gactactctgattgcaatagtggtaaacaggagaaagagcataataatctgatggcttat
ggccctcccatcgaaatggcagtggataagggcttggccaccatcttctcacccagatgc
tga
DBGET
integrated database retrieval system
