KEGG   Zingiber officinale (ginger): 122022303
Entry
122022303         CDS       T08725                                 
Name
(RefSeq) switch 2-like isoform X1
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
zof  Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:zof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:zof03400]
    122022303
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    122022303
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C ResIII DEAD HDA2-3 ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 122022303
NCBI-ProteinID: XP_042436196
LinkDB
Position
9B:35134873..35144251
AA seq 883 aa
MSLNRLKETLRPCSNSPSSATATDTAGAALASSSSASSWESPSEAPPSRKPPKSSLSQQL
QRLDAQSLSEGFQFRPPKPPFEEEKPAAEDEEESGGVPVTVRLPRDALLSQSASFEARGP
YEPLVLSSPGETHVVQVPASINCRLLAHQSDGIRFLYNLYKSNHGGVLGDDMGLGKTIQV
IAFLAAVTGKDNEHRADKVYHAVEKGPILIICPTSIIQNWENELSEWGDFSVSVYHGPNR
ELILEKLKTHGTEILVTSFDTFRIHDKILCEVPWNIVIVDEAHKLKNEKSRLYRACLGIK
TRKRFGLTGTIMQNRILELFNLFDWVAPGCLGTWEHFRDFYDEPLKHGQRLSAPERYIHI
ADERKKHLVAVLRKYLLRRTKEETIGHLMLGKEDNVVFCAMSDLQKRVYKRMLEQPDVQS
LINKDLPCSCGSPLTQVECCEKTVPDGIMWSYLHRENPEGCDSCPFCLVLPCLIKLQQIS
NHLELIKPNPKDDLEKQKKDAELASVIFGADVDLVGGNAQNENFMGLSDVEHCGKMRALE
KLLFSWITKGDKILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPMSLRQSLVDEFNKSP
SKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRYGQKRHVTVCRLLAA
GSLEELVYSRQIYKQQLSNIAVSGKMEKRYFQGVQDCKEFQGELFGICNLFHDLSDKLFT
SEIIEMHEKGGQHFDTQNKPLLQEIDDYVPPTSEILSHDTLNDGATVFENTRKLQDLGIV
YAHRNEDIVNMGPGLLGNNCTTSTKEDSADTTLPKTQANNSKRIHRVDVSAEQFKRNEFR
HVAHYMGMDCLEFSKWILSASPSKRLEVLESFNKKKKRRQLDY
NT seq 2652 nt   +upstreamnt  +downstreamnt
atgtcgctgaaccgcttaaaggaaaccctccgaccctgctccaactccccttcctccgcc
actgccaccgacacagccggagccgccctcgcttcctcctcgtccgcctcctcttgggaa
tctccgtccgaagcccctccttcgaggaagccacccaaatcctccctctcgcagcaactg
caacgcctcgatgcgcagtctctctccgagggcttccaattccgtccaccaaaaccaccc
tttgaagaagagaaaccagcggcggaggatgaggaggagagtggaggcgttccagtcacc
gtcagattgccgcgtgatgcgctcctttcgcagtctgcctcctttgaggctcgagggccc
tacgaacctttggttctctcctctcccggagaaactcatgttgttcaggttcctgcatca
atcaattgtaggctcctagcacatcaaagtgatggcattagatttttgtacaatttgtac
aaaagcaatcatggtggtgtacttggagatgacatggggctggggaaaaccatccaggtt
atagcttttcttgcagctgtaactggtaaagacaatgagcacagagctgataaggtgtat
catgctgtggaaaaaggccctatattaatcatctgtcccacttcaattattcagaactgg
gaaaatgagttatctgaatggggagatttcagtgtttcagtttatcatggaccaaataga
gagttaattcttgagaagcttaaaactcatggtactgagatacttgtaactagctttgac
actttcagaattcatgataagattttatgtgaagtcccatggaatattgttattgttgat
gaagcgcataagctgaaaaatgaaaaatcacgattatatagggcatgcttaggaataaaa
acaagaaaaagatttggtctaactggaactataatgcaaaacaggatattggagcttttt
aatctgtttgattgggttgcacctgggtgcttaggaacatgggaacactttcgtgatttc
tatgatgagcctttaaaacatggtcagaggttaagtgctcctgaaagatacattcacatt
gctgatgaacggaagaaacatcttgtcgctgttctgcgtaagtacttgttaagaaggact
aaagaggagacaataggacatttaatgttagggaaagaagataatgttgtcttctgtgca
atgagtgacttgcaaaagcgagtttataagaggatgctggaacaacctgatgtccaatct
ttaataaacaaggatctgccttgtagctgtggcagtcctttaactcaggttgaatgctgt
gagaagacagtcccagacggcatcatgtggtcttatttgcatagagagaatcctgaaggc
tgtgattcttgccctttctgcctagttcttccctgccttatcaagctacagcagataagc
aaccatttggagttgataaagcctaatcccaaggatgatcttgagaagcaaaagaaggat
gcagaattagcatctgttatctttggtgctgatgttgacttagttggtggcaatgctcag
aatgaaaatttcatggggcttagtgatgttgaacattgtggaaaaatgcgagcattggaa
aagctattattttcttggattacaaagggtgacaagattctactttttagctattctgtc
aggatgctggacatactggagaagtttctcataagaaaaggatattgcttttccaggcta
gatggttcaactccaatgagcttaagacagtcacttgttgatgaatttaataaaagtcct
agtaaacaggtatttctgatatctactcgggctggaggtttaggtctgaatctggtcagt
gctaaccgtgtggttatttttgatcccaactggaatcctgcacaagacttgcaggctcag
gacagatcatttcgttatggtcagaagcggcatgttacagtttgccgtcttcttgctgct
ggttcccttgaagagcttgtctattctcgccaaatttataaacagcagctttcaaacatt
gctgtctctgggaagatggaaaaacgttacttccaaggtgtccaggattgcaaagaattc
cagggcgagttatttggaatctgcaacctcttccatgatctctctgataagcttttcacg
agtgagataattgaaatgcatgagaaaggaggtcaacacttcgatactcagaacaaacca
cttcttcaagaaattgatgactatgttcctccaacaagtgaaatactatctcatgacaca
ttgaatgatggtgcaacagtctttgaaaacacaaggaagcttcaggacctaggcatagta
tatgctcaccgtaacgaggatattgtaaacatgggacctgggcttttgggaaacaattgt
accacaagtacgaaggaagactctgccgacacgactttaccaaagacacaagctaataac
tcgaaaaggatccatagggtggatgtctctgctgaacagttcaagaggaatgagtttaga
cacgttgctcactacatgggcatggattgcctggaattcagcaagtggatactctctgca
tcaccttcaaagaggcttgaagtgttagagagttttaacaagaaaaagaagcgcagacaa
cttgactattaa

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