Zingiber officinale (ginger): 122052197
Help
Entry
122052197 CDS
T08725
Name
(RefSeq) probable tocopherol cyclase, chloroplastic isoform X1
KO
K09834
tocopherol cyclase [EC:
5.5.1.24
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00130
Ubiquinone and other terpenoid-quinone biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01240
Biosynthesis of cofactors
Module
zof_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
122052197
Enzymes [BR:
zof01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.24 tocopherol cyclase
122052197
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tocopherol_cycl
Motif
Other DBs
NCBI-GeneID:
122052197
NCBI-ProteinID:
XP_042469544
LinkDB
All DBs
Position
3A:102628258..102638368
Genome browser
AA seq
405 aa
AA seq
DB search
MYHFDRTRRLFFEGWYFKVSIPDCRQSFCFMYSVENPAFPNGMGTLESVVYGPRFTGVGA
QILGPDDKYICQFTKESKNFWGNRHELTLGNTFLLGKGSAPTGEVQPQEFNQRVLEGFQV
SPLWHQGFIRDDGRSNYVETVKTARWEYSTCPVYGWGDVNSKQKSTAGWLATFPVFEPHW
QICMAGGLSTGWIEWDGKRFEFENAPSYSEKNWGGGFPRKWFWIQCNVFEGASGQVALTA
AGGLRKLPGFVENFENAALVGVHYGGSFYEFVPWNGTVSWDVAKWGFWHMSAENNTHMVE
LQATTTDPGTPLRAPTIEAGLVVACRDTCFGDLKLQLWERNFDGSKGKLILDVTSNMAAV
EVGGGPWFSNWKGTTSPPELIKRALAVNVDAENFFPLPFLKPPGL
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtaccattttgatcgaacaagacgattattttttgaaggatggtatttcaaggtttca
atccccgattgtcgacaaagcttttgctttatgtactcagtggagaatccagcattccct
aatggaatggggacactagagagtgtggtgtatggacctcgttttactggagttggagct
cagattctaggcccggatgataaatatatatgtcaattcacaaaagaatcgaagaacttt
tggggaaataggcatgaacttacgttggggaacacctttctccttgggaaaggatcagct
ccaacaggggaggtccaaccacaggaattcaatcaacgtgtattagagggtttccaagtc
agtccactttggcatcagggcttcatacgtgatgatggaaggtcaaattatgttgaaact
gtgaaaacagcacgctgggaatatagcacctgtccagtgtatggctggggtgatgtcaac
tcaaaacaaaaatcaacagctggttggctcgccacattccctgtgtttgaacctcattgg
caaatatgcatggcaggtggtttatcaacaggttggatagaatgggatggaaagcgattt
gaatttgaaaatgctccatcctactctgagaagaactggggtggtggatttccaagaaaa
tggttttggatacaatgtaatgttttcgaaggtgcatcaggtcaggttgctctgactgct
gctgggggcttgaggaagttgcctggatttgttgaaaattttgaaaatgctgccttggtt
ggagtccattatggtggatcgttctatgaatttgtgccttggaatggaactgtcagttgg
gatgtagctaagtggggcttttggcatatgtctgcagaaaacaacacacatatggttgaa
ttacaggccaccacaacagaccctggaacgcctttgcgagctccaaccattgaagctgga
ctcgttgtggcttgtagggacacatgttttggtgacctaaagctgcaactctgggaacgc
aatttcgatggtagtaaggggaagttgatcctggatgtcaccagcaacatggcagccgtg
gaagtcggtggtggtccatggttttccaattggaaggggacaacctccccgccggagttg
ataaagcgggcattggctgtcaatgttgatgccgaaaacttctttcctctgccatttctg
aagcctccaggtctttga
DBGET
integrated database retrieval system
