Zingiber officinale (ginger): 122052266
Help
Entry
122052266 CDS
T08725
Name
(RefSeq) isoleucine--tRNA ligase, chloroplastic/mitochondrial-like isoform X1
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122052266
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122052266
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zof03016
]
122052266
Enzymes [BR:
zof01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
122052266
Amino acid related enzymes [BR:
zof01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122052266
Transfer RNA biogenesis [BR:
zof03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122052266
Prokaryotic type
Other AARSs
122052266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
zf-FPG_IleRS
tRNA-synt_1_2
tRNA-synt_1e
Ribosomal_L12_N
Motif
Other DBs
NCBI-GeneID:
122052266
NCBI-ProteinID:
XP_042469644
LinkDB
All DBs
Position
3A:complement(110330054..110346638)
Genome browser
AA seq
1086 aa
AA seq
DB search
MEVAPLVKSSAAAATLFNSGEAKFALRVSSSLVSCRRIGFGRQNASFIIWPVLFSRPLTT
DLPHGCGGSGSKRRGRGPVMAAAKKASDGGIKEEGKYKHTVDLPKTTFGMRANAVVREPE
IQKLWEENQVFKRVSDRNTGRSFVLHDGPPYANGSLHMGHALNKILKDIINRYKLLRNYR
VNFVPGWDCHGLPIELKVLQSMDEDTRRELKPLKLREKAAKFAKNTVNIQMNSFKRFGVW
ADWDAPYLTLFPEYEAAQIEVFGKMALKGYIYRGRKPVHWSPSSRTALAEAELEYPEGHI
SKSIYATFKIISASSASPQLVEEFLPDLYLAIWTTTPWTIPANAAVAVNPELEYVVAELH
HAPEDVTVPLRKQTKVGGFLKFSDTKCFVIVASELVPALESKWGVKFAVHKIFPGSCLEN
FRYAHPISGKECPVVLGGDYITTESGTGLVHTAPGHGQEDYITGIKYGLPIISPVDDEGK
FTEEAGEFNGLEVLGAGNVAIVKYLDEQLSLVLEEPYKHKYPYDWRTKKPTIFRATEQWF
ASVDGFRDMAMDAIGKVNWIPTQAKNRIVAMTASRSDWCISRQRTWGVPIPVFYHVHSKE
PLISEETIAHVKDIVSKKGSDAWWYMSTEDLLPEKYRQNASEYYKGTDTMDVWFDSGSSW
AAVLGKRDGLCFPADLYLEGSDQHRGWFQSSLLTSIAATGIAPYSCVVTHGFVLDEKGMK
MSKSLGNVVDPDVVISGGKNTKDQPGYGADVLRLWVSSVDYTGDVLIGPQILRQMSDMYR
KLRGTLRFLLSNLHDWNLENTVSYTKLPKIDQYALYQLGNIVETIKDNYELYQFYKIYQI
IQRFTIVDLSNFYLDVAKDRLYVGGTTSLNRRSCQTVLAEHLISIVSVIAPILPHLAEDV
WQYLPFEYATEDGSAAKFAFEIKWPVPNKRWLQMPADDVDFWSLILELRSEVNKILENAR
VGKLIGSSLEAKVYLHSSDAGVASRLQELCLAENEADALHRIFITSQVEVLDSLNTDLST
RMPHTGKYSDTRSEIWIGVARADGSKCERCWNYTTQVGSFPEHPTLCARCYDVINIHPLP
AAAGVS
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagctccgctcgtcaagtcttccgccgccgccgccactttgttcaattcaggc
gaagccaagtttgcgctccgggtctcttcctcccttgtgtcgtgtcggaggattggcttt
ggccgtcaaaatgcttcctttataatatggcctgtgctgttctcccgacctttgactacc
gatctgccccacgggtgcggtggttctggatcgaaacggagaggccggggacctgtgatg
gcggcagcgaagaaggcgtctgatggtgggattaaagaggaaggaaaatataagcacacg
gtagacttgcccaagaccacatttgggatgagggctaatgcagtggttagagagcctgag
atccagaagttgtgggaggagaatcaggttttcaagagagtatcagatagaaatactggg
aggagctttgtccttcatgacggcccaccttatgcaaatggtagtctgcacatgggtcat
gctctaaataagattctgaaggacattatcaaccgatacaagcttcttcgtaattacaga
gtcaactttgttcctggttgggattgtcatggccttccaatagaattaaaagttctgcag
tctatggatgaagatactagaagggagttaaagcctttgaagttgagagaaaaggctgca
aagttcgcaaaaaatactgttaatattcagatgaactcttttaagcgctttggggtatgg
gctgattgggatgcaccttatctgacccttttcccagaatatgaagctgcacagatagaa
gtttttggcaagatggctcttaaaggatatatttataggggtcgaaaacctgttcactgg
agcccatcctcacgcacagctttggcagaggctgaattggagtatcctgagggacacatt
tctaaaagcatatatgctactttcaagatcattagcgcatcctcagcttcacctcagtta
gttgaggagtttcttccagatttgtacttggccatatggacaaccaccccttggactatt
cctgcaaatgcagctgttgctgtcaatcctgagcttgaatatgtggttgctgaattacat
catgctcctgaagatgttacagtccctttgaggaagcaaacaaaagttggtggtttcttg
aaatttagtgatacaaagtgttttgtgattgtggcttccgaacttgtacctgcacttgag
tctaagtggggggtgaaatttgcagtgcataaaattttcccaggatcatgtctggaaaat
ttcaggtatgctcaccctataagtggcaaggaatgccctgtagtgcttggtggagactat
atcacaacagagtcaggaactgggttagttcatactgctcctggtcatggacaagaagac
tatataactggcataaagtatggactacctattatttctccagtggatgatgaaggaaag
tttactgaggaagctggtgagtttaatggcctggaagttcttggggctggtaatgttgct
attgtgaagtatctggatgaacaattatcacttgttctcgaagagccatacaagcacaag
tatccttatgattggaggacaaagaaacctacgatatttagagccaccgaacaatggttt
gcatctgttgatggcttccgagacatggctatggatgcaattggtaaagtaaattggatt
cctacacaggcgaagaacagaattgttgctatgactgctagccgttctgattggtgtatc
tcacggcaaagaacttggggagttccaattcctgttttttatcatgttcactctaaagaa
ccactgatctctgaagaaaccattgcacatgttaaagatatagtgtcaaagaagggtagc
gatgcctggtggtacatgtcaaccgaagaccttcttcctgagaaatatcggcaaaacgca
tcagaatactacaaaggaactgatacaatggatgtttggtttgactctggctcatcttgg
gcagcagttttaggcaaaagggatgggctatgttttcctgcagatctgtaccttgaagga
tctgaccagcatcgtggatggtttcagagctctttattaaccagtattgcagcaacagga
attgctccctactcatgtgttgttacacatgggtttgtacttgatgaaaagggtatgaaa
atgagcaaatctcttggtaacgttgttgatcctgatgttgtaattagtggagggaaaaac
acaaaggatcaaccgggttatggagctgacgttcttcgtctttgggtttcaagtgttgac
tacactggagatgtgttgattggccctcaaattctccgccaaatgtctgatatgtatagg
aaactacgtggaacattgcggtttctattgtcaaatctgcatgattggaatctagaaaat
acagtttcatataccaagcttccaaaaattgaccagtatgcactataccaacttgggaat
attgtggagacaataaaggacaactatgagctttaccagttctacaaaatataccagatc
attcaacgctttacgatcgttgatctttcaaatttctatttagatgttgctaaagaccgg
ctttatgtagggggtactaccagtttaaatagacggagttgtcaaacagttcttgcagag
catcttatttctattgttagtgtaattgctccgattttgccacatttggctgaggatgtt
tggcagtacctcccttttgaatatgccactgaagatggttctgctgctaaatttgccttc
gagataaagtggccagttccaaacaaaaggtggctccagatgcccgctgatgatgttgat
ttttggagtctaatcctggagttgagatccgaggtgaacaaaatcctagaaaatgcaaga
gtcggaaagctgatcgggtccagcttggaggccaaggtttatctccattcctccgatgct
ggtgtggcctccagattgcaggaactgtgcctcgctgagaatgaagctgacgctctacat
aggattttcataacatctcaggtggaggttctcgattcactaaacacagatttaagtacc
agaatgccacataccggcaagtacagcgatacaagaagtgaaatttggatcggagttgct
cgggcagatggctccaagtgcgaaagatgttggaactatacaactcaagttggttccttc
ccagagcatccaactctatgtgctcgatgttacgacgtcatcaatatccatcctcttcct
gctgcagcaggagtcagttga
DBGET
integrated database retrieval system
