KEGG   Zingiber officinale (ginger): 122052315
Entry
122052315         CDS       T08725                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03420  Nucleotide excision repair
zof04120  Ubiquitin mediated proteolysis
zof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    122052315
   04120 Ubiquitin mediated proteolysis
    122052315
  09124 Replication and repair
   03420 Nucleotide excision repair
    122052315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:zof04121]
    122052315
   03400 DNA repair and recombination proteins [BR:zof03400]
    122052315
Enzymes [BR:zof01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     122052315
Ubiquitin system [BR:zof04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   122052315
  Multi subunit type E3
   SCF complex
    Ring finger protein
     122052315
   Cul2 complex
     122052315
   Cul3 complex
     122052315
   Cul4 complex
     122052315
   Cul7 complex
     122052315
   Cul8 complex
     122052315
   Cul9 complex
     122052315
DNA repair and recombination proteins [BR:zof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      122052315
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      122052315
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 122052315
NCBI-ProteinID: XP_042469720
LinkDB
Position
3A:complement(115961080..115974049)
AA seq 125 aa
MASLDTDVDMVPAGEGSSSGATGSSSLTPSTSSKKPKRFEIKKWNAVALWAWDIVVDNCA
ICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEF
QKYGH
NT seq 378 nt   +upstreamnt  +downstreamnt
atggcttccctcgacaccgacgtcgacatggttccggcaggcgaggggtcgagcagcggg
gctaccgggtcgtcctccttgaccccttccacttcctcgaagaagccgaaaaggttcgag
attaaaaagtggaacgctgtcgccctctgggcctgggatatcgtggtggacaactgtgct
atctgtaggaaccacatcatggatctttgcatcgagtgtcaggctaatcaggcgagtgcg
accagtgaggagtgcacagtggcttggggggtctgcaatcatgctttccatttccattgc
atcagccgatggctcaagactcgtcaagtttgccccctcgacaatagcgagtgggagttc
cagaaatatgggcactag

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