Zingiber officinale (ginger): 122052705
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Entry
122052705 CDS
T08725
Name
(RefSeq) probable E3 ubiquitin-protein ligase RZFP34
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122052705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122052705
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122052705
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122052705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-RING_5
zf-C3HC4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
122052705
NCBI-ProteinID:
XP_042470311
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All DBs
Position
3A:146938100..146943929
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AA seq
374 aa
AA seq
DB search
MLIGAVQHNSMIDDMKQCTAMWKIPSVLHNYPRFMGYQLLAMGENGLLNILVFAGASALV
ANLQYMGDLADLCGSSILEPKTSVYRDNESENLIECPISSDKSCYRAEERLVASDLSAKD
RLDNSLMMYGCPHYRRRCRIRAPCCNKIFDCRHCHNEAMNSIDVERRFRHDLPRQEVKEV
ICSLCGTEQEVQQVCISCGVCMGKYFCGICKLFDDEISKQQYHCGGCGICRIGGRENFFH
CYKCGCCYSIVLKNSHPCVEGAMHHDCPVCFEYLFESRNDVSVLMCGHTIHVQCLKEMQQ
HLQYACPLCSKSVCDMSKVWEIMDREIAATPMPAIYHDKKVRILCNDCGAASAVQYHVVG
QKCLKCKSYNTRQT
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgctgattggagctgttcaacataattctatgatagatgatatgaaacagtgtacagct
atgtggaagataccttcagtcttgcacaattatcctcgtttcatgggctaccaactactc
gctatgggtgaaaatggtttgctaaacattcttgtatttgcaggtgcatcagctctggta
gcaaatcttcaatatatgggggatttagctgacctttgtggatcttccatcttggagcca
aaaacgtcagtataccgagataatgagagtgagaatttgattgaatgcccaatctcatct
gataaaagctgttatagagctgaagaaagattagttgcttctgacctttctgccaaggat
agacttgacaatagtcttatgatgtatggatgcccacattatcgacgaagatgtcgtatt
cgcgcaccatgttgtaataagatttttgattgccgacattgccacaatgaggcaatgaat
tcaatagatgttgaaagaagatttagacacgaccttccacgtcaagaagttaaagaagtt
atatgttcactgtgtggcactgagcaagaggttcaacaagtttgcattagttgtggcgtt
tgtatgggtaaatacttctgtggaatttgcaagctgttcgatgatgaaatctcaaagcaa
caataccactgtggtggttgtggaatttgcaggattggtggacgggagaattttttccat
tgttataaatgtggttgctgctactcaattgtgttaaagaatagtcatccatgtgtggaa
ggagcaatgcatcatgattgccctgtatgttttgagtatttgttcgagtctagaaatgat
gtgagtgttctgatgtgtggtcacactatccatgtacaatgtttgaaggaaatgcagcaa
catttacagtatgcatgtcctctctgctccaagtctgtatgcgacatgtcaaaagtgtgg
gaaattatggacagggagatagcagccactccgatgcctgcaatctaccatgataagaag
gttcgcatcttgtgcaatgactgtggagcggcctcagcggttcagtatcatgtagtagga
caaaaatgcctcaagtgcaaatcttacaatactcgtcaaacttaa
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