Zingiber officinale (ginger): 122056683
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Entry
122056683 CDS
T08725
Name
(RefSeq) probable tocopherol cyclase, chloroplastic isoform X1
KO
K09834
tocopherol cyclase [EC:
5.5.1.24
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00130
Ubiquinone and other terpenoid-quinone biosynthesis
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01240
Biosynthesis of cofactors
Module
zof_M00112
Tocopherol/tocotorienol biosynthesis, homogentisate + phytyl/geranylgeranyl-PP => tocopherol/tocotorienol
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
122056683
Enzymes [BR:
zof01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.24 tocopherol cyclase
122056683
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GFIT
Motif
Pfam:
Tocopherol_cycl
Motif
Other DBs
NCBI-GeneID:
122056683
NCBI-ProteinID:
XP_042474683
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Position
3B:84127054..84137368
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AA seq
497 aa
AA seq
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MDAAASAALICRSSFPAVLAAPDRRPADLLTTGNLPFSSRRSFSVNGLKCRVASRDVEPV
STNSEGEYGTPASAAPVYTPTPPNRELRTPHSGYHFDRTRRLFFEGWYFKVSIPDCRQSF
CFMYSVENPAFPNGMGTLESVVYGPRFTGVGAQILGPDDKYICQFTKESKNFWGNRHELT
LGNTFLLGKGSAPTGEVQPQEFNERVLEGFQVSPLWHQGFIRDDGRSNYVETVKTARWEY
STCPVYGWGDVNSKQKSTAGWLATFPVFEPHWQICMAGGLSTGWIEWDGKRFEFENAPSY
SEKNWGGGFPRKWFWIQCNVFEGASGQVALTAAGGLRKLPGFVENFENAALVGVHYGGSF
YEFVPWNGTVSWDVAKWGFWHMSAENNTHMVELQATTTDPGTPLRAPTIEAGLVVACRDT
CFGDLKLQLWERNFDGSKGKLILDVTSNMAAVEVGGGPWFSNWKGTTSPPELIKQALAVN
VDAENFFPLPFLKPPGL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggatgccgccgcatccgctgctctaatctgccggagttccttccccgccgtgttggca
gcccccgatcgccggcctgccgatctgctgacgaccggaaatttgccgttctcctcccgt
cggtcattctctgtgaacgggctgaagtgtcgggttgcttctcgagacgtggagcctgtc
tcgacgaactcggaaggggaatatgggacgccggcctccgccgctccagtttacactccc
actcctccgaacagagaactccggactcctcatagcgggtaccattttgatcgaacaaga
cgattattttttgaaggatggtatttcaaggtttcaatccccgattgtcgacaaagcttt
tgctttatgtactcagtggagaatccagcattccctaatggaatggggacactagagagt
gtggtgtatggacctcgttttactggagttggagctcagattctaggcccggatgataaa
tatatatgtcaattcacaaaagaatcgaagaacttttggggaaataggcatgaacttacg
ttggggaacacctttctccttgggaaaggatcagctccaacaggggaggtccaaccacag
gaattcaatgaacgtgtattagagggtttccaagtcagtccactttggcatcagggcttc
atacgtgatgatggaaggtcaaattatgttgaaactgtgaaaacagcacgctgggaatat
agcacctgtccagtgtatggctggggtgatgtcaactcaaaacaaaaatcaacagctggt
tggctcgccacattccctgtgtttgaacctcattggcaaatatgcatggcaggtggttta
tcaacaggttggatagaatgggatggaaagcgatttgaatttgaaaatgctccatcctac
tctgagaagaactggggtggtggatttccaagaaaatggttttggatacaatgtaatgtt
ttcgaaggtgcatcaggtcaggttgctctgactgctgctgggggcttgaggaagttgcct
ggatttgttgaaaattttgaaaatgctgccttggttggagtccattatggtggatcgttc
tatgaatttgtgccttggaatggaactgtcagttgggatgtagctaagtggggcttttgg
catatgtctgcagaaaacaacacacatatggttgaattacaggccaccacaacagaccct
ggaacgcctttgcgagctccaaccattgaagctggactcgtcgtggcttgtagggacaca
tgttttggtgacctaaagctgcaactctgggaacgcaatttcgatggtagtaaggggaag
ttgatcctggatgtcaccagcaacatggcagccgtggaggtcggtggtggtccatggttc
tccaattggaaggggacaacctccccgccggagttgataaagcaggcattggctgtcaat
gttgatgccgaaaacttctttcctctgccatttctgaagcctccaggtctttga
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