Zymoseptoria tritici: MYCGRDRAFT_99061
Help
Entry
MYCGRDRAFT_99061 CDS
T02285
Name
(RefSeq) ABC transporter domain-containing protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
ztr
Zymoseptoria tritici
Pathway
ztr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ztr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MYCGRDRAFT_99061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ztr03019
]
MYCGRDRAFT_99061
Messenger RNA biogenesis [BR:
ztr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
MYCGRDRAFT_99061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
ORC-CDC6-like
AAA_15
AAA_28
PduV-EutP
Arf
nSTAND3
RsgA_GTPase
AAA_25
AAA_16
AAA_22
AAA_23
DUF3584
SRP54
DLIC
AAA_24
AAA_13
Motif
Other DBs
NCBI-GeneID:
13403575
NCBI-ProteinID:
XP_003854875
JGI:
Mycgr3_99061
UniProt:
F9X3L8
LinkDB
All DBs
Position
2:1309141..1310090
Genome browser
AA seq
281 aa
AA seq
DB search
MTKQEPPTISTKALYYAFPDGSKGLQDINLDLPANARCLLIGANGAGKTTLLRLLSGKRM
APSGTVSVASVDPFDTGLEGVTYLGLEWVLNPIVRSDIAVPELLKSVGGDHYPERRDQLV
KILDVDLSWHLHAVSDGERRRVQLCMGLLRPWTVLLLDEITVDLDLLSRHNFLQFLKQET
ETRDCTIVYATHILDNLAQWPTHLVHMSLGKIKKWGGIDEFEVPTTDGGVEGNSRLGHLV
MGWLREDLEERGPRNGPRSDGKTYENHEGKGGYGNEKSKGK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagcaagaaccaccaacaatctccaccaaggcactgtactatgcctttcccgac
ggcagcaaaggtctgcaagacatcaacctcgacctgcccgccaatgcccgttgtctcttg
atcggcgcgaacggcgcgggcaaaacgaccctcctccgcctcctctccggcaaacgcatg
gcgccttctgggaccgtgagcgtggcatccgtcgacccattcgacactggtctcgaaggc
gtgacatacctcggtctggaatgggttctcaaccccatcgtgcgctccgacattgccgtg
ccggaactcctcaagtctgtcggaggagaccactaccccgagcgtcgggatcaactggtc
aaaattctggacgtggacctgagctggcatctgcatgccgtgtctgacggagagaggaga
cgtgtgcagttgtgtatgggcctgctacgcccatggacagttcttctgctggacgaaatt
accgtcgacctggacctcctctctcggcacaacttcctgcagttccttaaacaggagacc
gagacccgggactgtacgattgtctatgcgacgcatatcttggacaacctggcgcagtgg
ccgacccacctggtgcacatgtcgctgggcaagatcaagaagtggggcgggattgacgag
tttgaggttccgactacagacggcggcgtggaggggaatagtcgcttgggccatctggtc
atggggtggttgagagaggatctagaggagagagggccgaggaatgggccgcggtcggat
ggtaagacgtatgagaaccatgagggtaagggagggtacggaaacgagaagagtaaggga
aagtga
DBGET
integrated database retrieval system
