Zootoca vivipara (common lizard): 118080386
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Entry
118080386 CDS
T07275
Symbol
TRAF3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04620
Toll-like receptor signaling pathway
zvi04621
NOD-like receptor signaling pathway
zvi04622
RIG-I-like receptor signaling pathway
zvi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
118080386 (TRAF3)
04621 NOD-like receptor signaling pathway
118080386 (TRAF3)
04622 RIG-I-like receptor signaling pathway
118080386 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118080386 (TRAF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF3_RING
zf-TRAF
CCDC18_1st
zf-C3HC4
Cast
Rod_CreS
CCDC18_2nd
ODF2_N
NOCA1_mid
ATG16
Med28
Spc29
MPS2
CCDC39
Tropomyosin
GAS
T4SS_LegC2C7
Astrin_C
DUF1664
KxDL
Sina_ZnF
T3SSipB
LIP-1
SPATA24
BLOC1_2
DUF3450
ADIP
Motif
Other DBs
NCBI-GeneID:
118080386
NCBI-ProteinID:
XP_034961443
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All DBs
Position
LG1:complement(14113553..14195600)
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AA seq
566 aa
AA seq
DB search
MDASKKTDPPVSVELVQKANPDRSPVPSIYVPEQGGYKEKFVNAVEDKYKCEKCHLILCN
PKQTECGHRYCETCMNALLSSAIPKCTACQETIVKDKIFKDNCCRRELLALQIFCRNENK
GCREQLTLGQLLTHLRNDCLFEELPCPRADCKEKILRRDLPDHVEKTCKYRETTCKYCKN
QVPMIMIQKHEDADCPCVMVTCPHKCSVSALLRKELNAHLSECINAPSTCSFKRYGCIFQ
GTNQQVKAHEATSAVQHVDLLKEWSNCLENKVAMLQNESLEKNKSIQTLHNQICSFEIEI
ERQKEMLRSNESKIHHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVT
ELESVDKNAGQGNRNAGMLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGILIWKI
RDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEY
DALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPSGEMNIASGCPVFVAQTV
LENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaagcaagaaaacagatcccccggtgtcagtggaactggtccaaaaggcaaat
cccgaccgcagcccagtgccatccatttacgtacccgaacaaggtggctacaaagagaaa
tttgtgaatgcagtggaggacaaatacaagtgtgaaaagtgccacctcatattgtgcaat
ccaaagcagacggaatgtggacatcggtattgtgagacctgtatgaatgctttgctaagc
tctgcaattccaaaatgtacagcatgtcaagaaacaatagtgaaagataagatatttaaa
gataattgctgtcggagggagcttcttgcccttcagatattctgcaggaatgaaaacaaa
ggttgcagagaacaattgaccttgggacagttgcttactcatctgagaaatgactgcctg
tttgaagagcttccatgccctcgtgctgattgtaaggagaaaatactgcggagagacttg
ccagaccacgtagagaagacctgtaaatatcgggaaacaacgtgtaaatactgtaaaaac
caagtcccaatgattatgatacaaaaacatgaagatgcagactgcccttgcgttatggtc
acatgtcctcataaatgtagcgtttcagcgctcctgagaaaagagttgaatgcacatttg
tcagaatgtattaatgccccaagcacctgtagttttaagcgttatggctgcatttttcag
ggaacaaaccagcaagtcaaagcacatgaagccacctcagcagtgcagcatgtagactta
ttgaaagagtggagtaattgtctagaaaataaggtggccatgctccagaatgaaagtttg
gaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaaatt
gagagacagaaggaaatgctgcggagtaatgagtccaaaatacaccacttacagcgagtg
atagacagccaagctgagaagctgaaagaactggacaaagagatccgtcctttccgacag
aactgggaggaagcagacagcatgaagagcagcgttgagtccctccagaacagagtgact
gagttggaaagcgtcgataagaatgccgggcaaggaaataggaatgcaggtatgctagaa
tcacaattatctaggcatgatcagatgctgagcgtccacgacatccgattggctgatatg
gacctccgctttcaagttttggaaacggccagctacaatggaatattgatctggaaaatc
cgagattataaacgtcggaagcaagaggcggtcatggggaagactttgtccttatacagc
caacctttttatacggggtacttcggctataagatgtgtgccagagtttatctcaatgga
gacggcatgggaaaagggacgcacttgtccttgttcttcgtcatcatgcggggagaatac
gacgcattgcttccgtggcccttcaagcagaaagtcaccctgatgttgatggatcaagga
ccttcccggcgccatttaggggatgctttcaaaccagaccccaacagcagtagtttcaag
aagcccagcggagaaatgaatattgcttctggctgcccagtgttcgttgcacagaccgtt
ctagaaaacggaacatatattaaagatgatactatttttattaaagtcatagtggataca
tcggacctaccagacccctga
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