Zootoca vivipara (common lizard): 118082712
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Entry
118082712 CDS
T07275
Symbol
OTOF
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
zvi
Zootoca vivipara (common lizard)
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zvi04131
]
118082712 (OTOF)
Membrane trafficking [BR:
zvi04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118082712 (OTOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
118082712
NCBI-ProteinID:
XP_034966421
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All DBs
Position
LG3:complement(245680..408265)
Genome browser
AA seq
2003 aa
AA seq
DB search
MALVVHLKTVTDLRGKGDRIAKVAFRGLSFYTRVLENCEDEAPFDETFRWPVASSIDVNE
MLEVQVFNYSKVFSNRLIGTFQMVLQKVVEEGQLEVTDTLIDDNNASIQTSISIEIRYQA
MDGTVGAWNDNEFLESPNAPSEGDPHEMDVLLPPQRQSPSKTSAAERALRRAGKGVFSAM
KLGKARGQKDDHHRKQDEPAVLEAEDLDRKAMRLGGGLDPDTISLASVTAVTTNVSNKRS
KPDIKMEPSAGRPMDYQVSVTVIEARQLVGLNMDPVVCVEVGDEKKYTSMKESTNCPYYN
EYFVFDFHVPPDVMFDKIVKISVIHSKNLLRSGTLVGSFKMDVGTVYTQPEHQFYHKWAL
LSDPEDITAGLKGYVKVDIAVVGKGDNIKTPHKANETDEDDIEGNLLLPDGVPPERQWAR
FYIKIYRAEGLPRMNTSIMANVKKALIGENKDLVDPYVQVLFAGQKGKTSVQKSSYEPTW
NEQIAFTEMFPPLCKRIKVQIRDSDKVNDVAIGTHFIDLRKISNEGDKGFLPTFGPAWVN
MYGSTRNYTLMDEHQDLNEGLGEGVSFRARLLLSLAVEILDTSNPELTSSTEVQVEMATA
VADNCTGKMDEFFLFGSFLEATMIDRKNGDKPINFEVTIGNYGNEIDGMSKPMIKKKKDS
GGDGNEEESQLLENESDEESTDDGEFVSISSSPPLRPLITDRNYFHLPYFEKKPCIYIKS
WWQDQRRRLYNSNIMDKIADKLEEGLNDVHEMMKTEKPHPERRLRGVLEELSSACLRFVT
LSNKDQNHSSRTRLDRERLKSCMRELETMGQQAKTMRSQVKKTTIRDKLKQAQNFLQKLR
FLADEPQHSIPDVFIWMMSNNKRIAYARIPSKDILYSIVDEETGKDCAKVKTVFLRLPGK
KGFGPAGWTVQAKMEIYLWLGLNKHRKDFLSGLPCGFEEKKLPKGQNIPSFPPISLLYSM
KQVFQLRVHMYQARSLFAADSSGLSDPFARVFFITQSQCTEVLQETLCPTWDQLLVFDNV
ELYGEVHEMRDDPPIIVIEIYDQDTVGKADFMGRTFAKPVLKMSDEEYCPPRFPPQLEYY
QIYRGNSTAGDLLAAFELLQIGPAGKSELPPIDGPTDMDRGPILPVPLGIRPVLSKYRVE
ILFWGLRDLKRVNLAQVDRPRVDIECAGRGVQSSLIQNYKKNPNFSTLVKWFEVDLPENE
LLHPPLNIRVVDCRAFGRYTLVGSHAVNSLRKFIYRPPDKKAQHWSTAAKLMSAYAALAN
GGPISHPTGEIVVNMEPEAPIKKMETMVKLEANCDAVVKVDVSEEEKEKKKKKKKKGGAE
EEEDDEPDESMLDWWSKYFASIETMKELLRQQEAAAAEAEEKDEMDMSEGSKGQGKTKEK
VKAPKEDKKKKQQQGQPPTSEGPEKKNKQKIDELKVFPKELETEFDSFEDWLHTFSLFRG
KIGDDDDHAADEDRIVGRFKGSMCVYKVPLPDDITKEAGYDPNFGMFQGIPSNDPINVLV
RVYVVRATDLHPADINGKADPYVVIKLGKTDIKDKENYISKQLNPIFGKSFDIEATFPME
SMLTVAIYDWDLVGSDDLIGETKIDLENRYYSKHRATCGITQNYSIHGYNMWRDPQKPTQ
ILSKLCKEGKLDGPHYGPGGRVKVTNRVFTGPTEVEDENGQKKQTDEHLALTVLHHWEEI
PRVGCKLVPEHVETRPLLNPDKPGIEQGRLELWVDMFPMDMPAPGPAIDISPRKPKKYEL
RVIVWNTDEVVLEDDDYFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYL
FPFDYLAAEEKIVISKKESMFSWDETEYKIPARLTLQVWDADHFSADDFLGGIELDLNRF
PRGAKTAKQCSMELGTGEIEVPMVSIFKQKRVKGWWPFLARDENDEMEMTGKVEAELHLL
TAEEAEKSPAGLARNEPDPLEKPNRPDTSFIWFLNPLKSIRYFIWHTYRWLLLKILLLVL
LLLMVGLFLYSMPGYMVKKLLGA
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atggccttggtcgtgcacctgaagacggtcactgacctgcggggcaaaggagaccggatc
gccaaagtagctttcagaggcctctccttctacacccgagtgctcgagaactgcgaggat
gaagctccgttcgatgagaccttccggtggcctgttgcaagcagcattgacgtcaacgag
atgctggaggtccaggtcttcaactacagcaaagtcttctccaacaggctcatcgggaca
ttccagatggttttgcagaaggtggtggaggaagggcagctggaggtgacggacaccttg
atcgatgataacaacgcttccatccagaccagtatctccatcgagatcaggtaccaggcc
atggatggcaccgtcggggcttggaacgacaacgagttcttggagagccccaacgcaccc
tcggagggagacccccacgagatggacgtcttgctgcccccccagcggcagtctcccagc
aagaccagcgccgcagagagggctctccggagagctgggaaaggagtcttttcagccatg
aagctgggcaaagcacgtggtcaaaaagatgaccaccacaggaagcaagatgaacctgca
gtcctggaagccgaagacctggaccggaaggcgatgcggctgggaggcggcctggaccca
gacaccatctccctggcatccgtcacagctgtcaccaccaatgtatccaacaagagatcc
aagccagatattaaaatggagcccagtgctgggaggcctatggactaccaggtcagcgtc
acggtcattgaggcgcggcagctggtggggctcaacatggaccccgtggtgtgcgtggag
gtgggggacgagaagaaatacacgtccatgaaggaatcaaccaactgcccctattacaat
gagtactttgtcttcgacttccacgttcccccagacgtcatgttcgacaaaatcgtcaag
atatcggtgattcactccaagaacctcctgcgcagtggaaccttagtcggctccttcaag
atggatgtcggaaccgtttacacccagccagagcaccagttctaccacaagtgggcgctc
ctctcggacccggaggacatcaccgcagggctgaagggttatgtgaaggtggacatcgcg
gtggtgggcaaaggggacaacatcaagacgccccacaaggccaatgagacggatgaggat
gacattgagggaaacctgctccttcccgacggcgtccctccggagaggcagtgggctcgc
ttctacatcaagatctaccgggcagagggtctcccgcgcatgaacaccagcatcatggcc
aacgtcaagaaggccctcattggagagaacaaggacctggtggacccctatgtccaggtc
ctctttgcaggacaaaaggggaaaacctcggtccagaaaagcagctatgagcccacgtgg
aacgagcagattgccttcacggaaatgttccccccactgtgcaagcggatcaaggtccag
atccgcgattccgacaaggtcaacgacgtggccattgggacccatttcatcgacctcagg
aagatctccaacgaaggcgacaaaggcttcctgcccacgtttggccctgcctgggtgaac
atgtacggttccacgcgcaactacaccctgatggacgagcaccaggacttgaacgagggc
ctgggcgaaggggtctccttccgtgcccgcctcctcctcagcctggcggtggaaatcttg
gataccagcaacccagagctcaccagctccactgaagtccaagttgagatggccacggca
gttgccgacaactgcacaggcaagatggacgagttctttctctttggatccttcctggag
gctaccatgattgacaggaaaaatggagacaagcccatcaactttgaggtcaccataggc
aattacggcaatgaaatcgacgggatgtccaagcccatgatcaagaagaagaaagatagt
ggaggagatggcaacgaggaagaatctcagctgctggagaacgagagtgacgaggaaagc
acagacgacggagaatttgtctccatctcctcttctccacctttgaggcctttgatcacc
gacaggaactacttccacctgccatactttgagaagaagccgtgcatctacatcaagagc
tggtggcaggatcagcggaggcgtctctacaactccaacatcatggacaagattgcggac
aagctggaagaaggcttgaatgacgttcatgagatgatgaagactgagaagccccacccg
gaacggcgcctccgaggggtcctggaggagctgagcagtgcatgcctgcggtttgtgacc
ctctccaacaaggaccagaaccattcctcccggacgcggctggaccgggagaggctgaaa
tcctgtatgcgggaactggagacaatgggccagcaggccaagaccatgcgatcccaggtc
aagaaaaccaccatcagggacaagctgaagcaggcgcagaacttcttgcaaaagctgcgg
ttcctggcagatgagccccagcacagcatcccggacgtcttcatctggatgatgagcaac
aacaagcgcatcgcctacgcccgcatcccctccaaggacatcctctactccatcgtggac
gaggaaacggggaaggactgcgccaaagtgaagaccgtcttcctgaggttaccggggaaa
aagggttttgggccagccggctggacggttcaagccaagatggagatctatttgtggctg
gggctcaacaaacatcgcaaggacttcctcagcggcctgccctgcggctttgaggagaag
aaacttcccaagggccagaacatcccttccttcccacccatcagcctcctgtacagcatg
aagcaggtcttccagcttcgtgtccacatgtaccaagccaggagtctcttcgctgccgac
agcagtggcctctccgacccctttgctcgcgtctttttcatcacacagagccagtgcacg
gaggtcctccaagagacactttgccccacatgggaccagttgctggtgtttgacaacgtg
gaactatatggggaagtccatgagatgcgggacgaccctcccatcattgtcatcgagatc
tatgaccaggacacagtgggaaaggctgactttatgggccgaacgtttgccaagcccgtg
ttgaagatgtcggatgaggagtactgtccgccccgcttcccaccccagctagagtactat
cagatctaccggggcaactccaccgccggggacctgctggctgccttcgaactgctccag
attggcccagccgggaagtcagagctgcctcccattgacggccccacagacatggatcgg
ggccccatcctgcctgtgcctttgggaatccgccctgtgttgagcaaatacagagtggag
atcttgttctgggggctgagagacctgaagcgcgtgaacttggcccaggtggatcggcct
cgagtggacatcgaatgtgccgggaggggagtccagtcgtccctcatccagaactacaag
aaaaaccccaatttcagcaccttggtgaaatggtttgaagtggatctccctgagaacgag
cttcttcatccccccctgaacatccgcgttgtggattgccgtgcttttgggcgttacacc
ctcgtgggcagccacgctgtgaactccctgcggaaattcatctacaggcctccggataag
aaagcccagcactggagtacagcagctaagctcatgagtgcctatgcagccctggccaac
ggaggacccatctctcaccccacaggggaaatcgtggttaacatggagcccgaggctccc
atcaagaagatggagaccatggtcaagctggaagcgaactgtgatgcggttgtgaaagtg
gatgtgtcggaagaagagaaggagaagaagaagaaaaagaagaagaaagggggtgcagag
gaggaggaggacgatgagcctgacgagagcatgctggactggtggtccaagtattttgct
tccatcgagacgatgaaggagctgcttcgacagcaggaggcggctgcggcggaagcggaa
gagaaggatgagatggatatgtctgagggctccaagggccaagggaagaccaaggagaaa
gtcaaggccccaaaagaggacaagaagaagaagcagcaacaggggcagccgccgacatcc
gagggtcccgagaagaagaacaagcagaagatcgatgagcttaaggtgttccccaaagag
ctggagacggaatttgacagctttgaggactggctgcacactttcagcctctttcggggg
aagattggcgatgacgatgaccacgcagccgacgaggatcgcatcgtgggcaggttcaag
ggctccatgtgcgtctacaaagtgccactccctgatgacatcaccaaagaggcggggtac
gacccaaatttcggcatgttccagggcatcccaagcaacgaccccatcaatgttctggtc
cgggtctacgtggtgagggccaccgatctgcaccccgccgacatcaacggcaaagctgac
ccatatgtcgtcatcaagcttgggaagacggacatcaaggacaaggagaactacatctcc
aaacagctgaaccccatttttggaaagtcgttcgacatcgaggccactttccccatggaa
tcgatgctgacagtggctatttacgactgggatcttgtgggctccgatgatctgattggc
gagaccaagatcgacctggagaaccgatactacagcaagcacagggcgacctgtgggatc
acccagaactattccatccacggttacaatatgtggcgagaccctcagaagcccacccag
atcttgtccaagttatgcaaagaggggaagctggacgggccccactacggccctggcggc
agagtgaaggtgaccaaccgggtcttcacgggacccacagaagtggaggacgaaaacggc
cagaagaaacagacggacgaacatctagcgctgactgtcttgcaccactgggaggagatc
ccgcgtgtgggctgcaaactggtgccagaacacgtggaaacgcggcccttgctgaacccg
gacaagccaggcattgagcagggacggctggagttgtgggtggatatgttccccatggac
atgccggcaccaggacccgccattgacatatcgccgaggaagccaaagaaatacgagctt
agagtgatagtgtggaacacagatgaggtagtcctggaggacgatgattacttcactggc
gagaaatccagtgacatttttgtccggggatggctgaaggggcagcaagaagacaagcag
gacacagacgtccactatcactcgctgaccggcgaggggaacttcaactggcgttacctc
tttcctttcgactaccttgcggctgaggagaagattgttatctcgaagaaagagtccatg
ttctcctgggacgagaccgagtacaagattccggcccgactcacgctacaagtgtgggac
gccgaccacttttccgccgatgacttcctcggaggcattgagcttgacctgaaccgcttc
ccacgtggcgctaagaccgccaagcagtgcagcatggagctggggacgggtgagattgag
gtgcccatggtctctatcttcaaacagaagagggtgaagggctggtggcccttcttggca
cgagacgagaacgacgaaatggagatgacgggaaaagtggaggccgagcttcacctcctg
acggccgaggaagccgagaaaagtccggccgggctggctcgtaacgagcccgacccattg
gagaaacccaaccgcccagataccagcttcatttggttcctgaaccctctcaagtccatc
cgctactttatctggcacacgtaccgctggcttctgctgaaaatcctcctcctcgttctc
ttgctccttatggtcggactcttcttgtactccatgcccggctacatggtcaagaagctg
ctcggggcctga
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