Zootoca vivipara (common lizard): 118082968 Help Entry 118082968         CDS       T07275                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism zvi  Zootoca vivipara (common lizard) Pathway zvi04115   p53 signaling pathway zvi04145   Phagosome zvi04148   Efferocytosis zvi04350   TGF-beta signaling pathway zvi04510   Focal adhesion zvi04512   ECM-receptor interaction zvi04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:zvi00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     118082968 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     118082968 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     118082968 (THBS1)    04148 Efferocytosis     118082968 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     118082968 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     118082968 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     118082968 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:zvi04131]     118082968 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:zvi00536]     118082968 (THBS1) Membrane trafficking [BR:zvi04131]  Endocytosis   Phagocytosis    Opsonins     118082968 (THBS1) Glycosaminoglycan binding proteins [BR:zvi00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    118082968 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC EGF_3 TSP1_ADAMTS cEGF TSP1_CCN EGF Motif Other DBs NCBI-GeneID:  118082968 NCBI-ProteinID:  XP_034966766 LinkDB All DBs Position LG1:38691056..38710995 Genome browser AA seq 1176 aa AA seqDB search MELPGGLFLLLMLGVCATNRIPENGDDDSVFDLFELVGLSRKGARKALGVHPVKGPETSS PAYRIDDANRIPAVPDYKFQDILDAIQAEKGFILLANLRPMKKSPGTLLAVERKDGSGYV FKLVLNGKAKTLDLSVFPKEGNQSLVSVEEVELPNAQWNNITLLVQEDQAQLYVGCEKLM NVELEIPIQNILTRDLASSARLRIAKGGVNDNFQGMLQNMRFVFGTTVEAILRNKGCESS TRRVIILDNPMNGSRPAIRTNYIGHKTKDIQAICGFSCDELNNVFIELQSLRALVTTLKD SVSKMDGIFQEVGATRYRTSPGVCIHNDVMYQNTAEWTTDSCTTCTCQNSVVMCHKVSCP LMPCSNATVPDGECCPRCWPSDYADDIWSPWSEWTTCSATCGNGIQQRGRSCDRINHRCE GSSVQTRICNMQECDKRFKQDGAWSHWSPWSSCSVTCGTGVITRIRLCNSPLPQMSGKEC EGEARENKPCQKDPCPINGNWGPWSPWDTCPVTCGGGLQQRGRLCNNPEPQYGGKDCIGD TKDTQICNKEDCPIDGCLSNPCFAGTTCTSFPDGSWKCGACPAGYRGNGIKCKDIDECQE VPDACFVIGGVHRCENTEPGYHCQPCPPRFSGTQPFGRGVENAIANKQVCKPRDPCKDGT HDCNKNAKCTYLGIFSDPMYRCECKPGYAGNGIICGEDTDLDGWPNTNLPCVANATYHCS KDNCPNLPNSGQEDYDKDGIGDACDNDDDNDNIVDDRDNCPFIYNPQQYDYDRDDVGDRC DNCPYNHNPDQIDTDNNGEGDACAVDIDGDGILNERDNCQYVYNVDQKDTDLDGVGDQCD NCPMEHNPDQTDSDSDRIGDKCDSNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDAC DHDDDNDGIPDDKDNCRLVANPDQLDSDGDGRGDACKDDFDQDKVLDIHDICPENVDISE TDFRRFQMVPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGFDEFNAVDFSGTFFI NTERDDDYAGFVFGYQSSSRFYVVMWKQITQSYWDPTPTKAQGYSGLAIKVVNSTTGPGE HLRNALWHTGNTPGQVRTLWHDPHHIGWKDFTAYRWRLSHRPKTGYIRVVMFEGKKIMAD SGPIYDKTYAGGRLGLFVFSQEMVFFSDLKYECKDP NT seq 3531 nt NT seq  +upstreamnt  +downstreamnt atggagttaccgggcggcctctttctcctcctgatgctgggggtctgcgcaacgaaccga attccagaaaatggtgatgatgacagtgttttcgatctctttgagttagttggtcttagt cgcaagggagctcgcaaggcactaggggtgcatccagtcaagggacccgagacatccagc cctgcctaccgcattgatgatgccaaccgtatccctgctgttcctgactacaaattccaa gacattcttgatgccatccaagctgagaagggcttcattctgttagcaaaccttcgccca atgaagaagagccctggaacgctgctggctgtggagcgcaaagacggctctggctatgtc ttcaagttggtgctgaatggcaaggctaaaaccttggacctgagtgtcttccccaaggag ggcaaccagagtctggtgtcggtggaggaagttgagttgcccaacgcacagtggaacaac atcaccctcctagtccaggaagatcaggctcagctctacgtggggtgtgagaaactgatg aatgttgagctggaaatccctattcagaacatcctcaccagggacctggccagcagtgcc agactccgcattgccaaagggggagtcaatgacaacttccagggaatgctgcagaatatg cggtttgtgtttggaaccacagtggaagccatcctgagaaacaaaggctgtgaaagctcc accagaagagttattatattggacaatcccatgaatggctcccgtccagccatccgcact aactacattggccataaaacaaaagacatccaggcaatctgtggattctcctgtgatgaa ctaaacaatgtgtttatagaattgcaaagtctgcgtgccctggttacaacacttaaagat tcagtcagcaaaatggatggtatttttcaggaagtgggtgctactcggtataggacaagt cctggagtatgcatccataatgatgttatgtaccaaaacacagccgagtggaccacagat agttgtactacatgtacttgccagaactctgttgttatgtgccataaagtatcttgccct ctcatgccttgttccaatgccaccgttcctgatggagaatgctgcccacgatgttggccc agtgactatgcagatgacatttggtctccttggtctgaatggacgacctgctctgcgacc tgtggcaatggcattcaacagagaggtcgctcttgtgatagaatcaaccatcgctgtgaa ggctcttctgtacaaacacgaatttgcaatatgcaggaatgtgataagagattcaaacag gatggtgcctggagccactggtccccttggtcttcctgctctgtcacttgtggaactgga gtgatcactagaatccggctgtgcaactctccactacctcagatgagtggcaaagagtgt gagggagaggcaagagaaaacaaaccatgccagaaagacccttgcccaataaatgggaac tggggaccatggtcaccatgggacacctgtccagtcacctgcggagggggccttcagcag cgcggtcgtctctgcaacaatcctgagcctcagtatggagggaaggattgtattggtgat actaaggacacccagatctgcaacaaggaggattgcccaattgatgggtgcctgtctaac ccttgctttgcgggaactacatgtactagttttcctgatggttcctggaaatgtggtgcc tgtccagctggctatcgtggaaacggaattaaatgcaaagatattgatgagtgccaagag gtcccagatgcctgctttgtcattggtggagtccacaggtgtgagaacactgagcctgga taccattgccaaccttgcccaccacgcttttctggaacacagccctttggtcgaggtgtg gagaatgcaatagcaaacaagcaggtctgtaaaccacgtgacccatgtaaggatggaact catgactgcaataagaatgctaagtgcacttaccttggcatcttcagtgaccccatgtat cgctgtgaatgtaagccaggctatgctggtaatggcattatctgtggagaagacacagac ttagatggatggccaaatacaaacctgccctgtgttgccaatgctacctaccactgcagt aaagataactgtcccaaccttcccaattctgggcaagaagactatgataaggatggaatt ggtgatgcttgtgataatgatgatgacaatgacaacattgtagatgacagagacaactgc ccattcatctacaatccacaacaatatgactatgatagggatgatgttggtgatcgctgt gataattgcccatacaatcacaacccggatcagatagacactgataacaatggagaagga gacgcgtgtgctgtggatattgatggagatggcattcttaatgaaagagacaactgccag tatgtatataatgtggaccagaaggatacagatttggatggtgttggagaccagtgtgac aactgtcctatggaacacaatccagatcagactgattctgactctgaccgcataggggac aaatgcgatagcaaccaggacattgacgaagatggccatcaaaataatctcgataactgt ccctatgtgcccaatgcaaaccaagctgaccatgacaaggatggaaaaggtgatgcctgt gatcacgatgatgataatgatggcatccctgatgacaaagataattgtagactggttgcc aacccagaccaacttgactctgatggtgatgggcgtggagatgcatgcaaagatgacttt gaccaagacaaggtgctggacattcatgacatctgccctgagaatgttgacatcagtgag acagatttccgccgatttcagatggttcccctggatcctaagggcacatctcagaatgat cctaattgggttgttcgtcaccaaggcaaagaactggttcagactgtcaactgtgatcct ggacttgcagttggctttgatgaatttaatgctgttgatttcagcggcacattcttcatt aatacagaaagggatgatgattatgctggttttgtgtttggttatcagtccagtagccgt ttttatgtcgtcatgtggaagcaaatcacccagtcttactgggatccaacaccaaccaaa gctcagggatattccggtcttgctatcaaagtagtgaactccaccacaggtcctggagaa cacctccgtaatgcactgtggcacactggaaatactcctggacaggtgcggactctgtgg catgaccctcaccatataggctggaaagatttcactgcctacagatggcgtctgagtcac agaccaaagactggttacattagagttgtaatgtttgaaggaaagaagatcatggctgat tctggaccaatctatgataaaacctatgctggtggtcgtttaggattatttgtcttctct caagaaatggtgttcttctcagatcttaaatatgagtgcaaagatccgtga

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