Zootoca vivipara (common lizard): 118086198
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Entry
118086198 CDS
T07275
Symbol
ARHGEF1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04270
Vascular smooth muscle contraction
zvi04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118086198 (ARHGEF1)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
118086198 (ARHGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zvi04131
]
118086198 (ARHGEF1)
Membrane trafficking [BR:
zvi04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118086198 (ARHGEF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
YfdX
PH_5
Motif
Other DBs
NCBI-GeneID:
118086198
NCBI-ProteinID:
XP_034973445
LinkDB
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Position
LG6:20291461..20343163
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AA seq
1082 aa
AA seq
DB search
MELEEGYNGNPALGARSGSAMAIIGAEDEDFENDIEPFQNPDAQSSMFQSLDLLTRHPAY
LMVFLQHVVLQFDSSPVLCYLHVDLILNRLGPKEAKKQFVEFCHMFLDKAGLLRVPVPSS
VQFELDRNRPELLPDDHQRKHLQDIQAFQEQEIARQLEDFREKRKMGMTPGESELFELEG
YRTKDKGIREAKEKQLAELLMVKLEEMHPTISVDEEKSSAIFAAVVTYMKSLGVKTKAAD
NKKSKANFFRKKISGTKKAEEAPKSKKSFSILDPARWNRGDSHYSDYRQSKPEGEAADKA
PASDRKGKLLEGGPGRGKGNFSGSDPAGVSVTVHPPPGEGNDREQGVDSQLPTDASDSPV
TEQPLAGEQPPAEDGTENERRRKRLSAKLGRSESLRVYERKRSQRGSAKGKQPRSRSDVD
VEAAARANEMEEKQSLEQARQKQGSRNLEPGGAGGGEPPPSFLHPQSEETEPRVSELELD
PPNWRELVPNDTLLRLKKSEVKRQEVINELFITEHAHLRMLRVLLEVFYQPLLAEEHFRE
SELVNIFPSLEDLIDEHKVFLESLKKLREENNSLVSEIGSTLLARFDGSEGNWFQKISAR
FCSRQSFALEQLKAKQKKEPRFNQFIQEAESQPRCRRLQLKDIIPIEMQRLTKYPLLLHS
IAKCTEEAEERQKVQRAADCCRQILNHVNQEVRNMENFLKLKDYQRRLDLSNLKQSTDPL
LSEFRNIDITRKNLVYEGPLTWRVTKDKSVDVHVLLLDDILMLLQKQEERLVLKCHSRTI
TPTPDGKQMLSPIISLNSAMTREVATDIKAFYVIFSWEDGAQIYELVAQTVSERKNWCSM
ISETAGCLKVPIKPRLSVPNSRSSPHSPSFGYSEGLLGGAENGSSHKETLHSEAEREKDG
MLEGAEFEGRSPVSGPKLGKATEEILDDMLNLHKHQPVGQGALSSAAQDRISALRRLLQV
SEEGEVAFPAAEPVDRPPENGNPREGEEEEEWETGHGTEADSSRRHPGGLPNGPLEPEWG
SEHLDREGSSSIILTHQQSDGVKHHLRLLEDAIQGLKEIEADYWHLQQLIGKLTPSQPPS
FT
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atggagttggaggaaggatacaatgggaacccggcactgggtgcccggagtgggtcagcc
atggcgatcatcggagcagaagacgaggacttcgaaaacgacatcgagccattccagaac
ccagatgcacaaagcagcatgttccagagcctggacctcttaacacggcatccggcctac
ttgatggttttcctgcagcatgtggtacttcagttcgactccagccctgtgctctgttac
cttcatgtggacctcatactgaatcgcctcgggcccaaggaggcgaagaagcagtttgtg
gaattctgccatatgttcctagacaaagctgggctgctgagggttcctgttccatcctcc
gtacagtttgagctggatcgtaaccgacccgagcttctacccgatgaccatcagcgaaag
cacttgcaggacatccaggcgttccaagaacaggagattgctcggcagctggaagacttc
agggaaaagaggaagatggggatgaccccgggggagtctgagctctttgagttggaaggc
tatcggacgaaggacaaaggcatccgcgaggccaaggagaagcagctggccgagttgctg
atggtgaagctggaggagatgcaccccaccatttctgtcgacgaggagaaaagttctgcc
attttcgccgccgttgtgacatatatgaagtccctgggggttaagacgaaagctgccgat
aacaagaagtcgaaagccaacttcttccgcaagaagatttcgggtaccaagaaggccgag
gaagctcccaaatcaaagaagagcttcagcattttggacccagcacgctggaaccgggga
gactcccactattctgattacagacaatccaaaccagagggtgaagcagctgataaggcg
ccggcctcggacaggaaaggaaagctattggagggaggcccagggcggggcaagggaaac
ttttcggggtcggatcctgcgggagtgtccgtcactgttcacccccctcctggggagggc
aatgacagagagcagggtgttgacagtcagcttccaacggatgcctcagactccccggtt
acagagcagccgttggctggggagcagcccccagctgaagatggcacagaaaacgaaaga
aggcgaaaaaggctgtcagcaaagctgggccgctccgagagcctgcgggtatacgagcgg
aagcggtctcagcgcggctcagccaagggcaagcaaccacgatcgcggagcgacgtggac
gtcgaagccgctgcccgtgccaatgagatggaggagaagcagtccctagaacaggctcgg
cagaagcaggggagtcgcaatctagagccgggaggggctgggggaggggagcccccgccg
tcctttctgcatccccagtctgaggagactgagccgcgtgtttcggaactggagcttgac
ccgccaaactggcgggagctcgtccccaacgacaccctcctcaggctgaagaaaagcgaa
gtgaagcggcaagaggtcattaatgagctgttcatcaccgaacacgcccacctgcgcatg
ctccgggtgctgctagaggtcttctaccaacctctgctggccgaagagcacttcagggag
agcgaactggtcaacatcttccccagcttggaggacttgatcgatgaacacaaggtgttt
ctggagagcttgaagaagctgagggaggaaaacaattcccttgtttctgaaatcgggagc
actctgctggctcggtttgatggttctgaaggaaactggttccagaagatctcggcccgt
ttctgcagccgccagtcatttgctctggagcagctgaaagccaagcagaagaaggagccc
cgtttcaaccagttcatccaggaggcagaaagccagcctcgttgccggcggttgcaactg
aaggacataatccccatcgagatgcagaggctgaccaagtacccgctcctccttcacagc
attgccaaatgcacagaggaggccgaggaacggcagaaagtgcagagggcagctgactgc
tgccggcagatcctcaaccacgttaatcaggaggtgcgcaacatggagaactttctgaaa
ctgaaagattatcagcgtcgcctggacctctccaacctgaagcaaagtactgatccactg
cttagtgaatttaggaacattgacatcaccaggaaaaacctcgtgtatgagggacccctg
acttggcgtgtcaccaaggataaatcagtagatgtccacgttctcctgctggacgacatc
ttgatgcttctgcagaagcaggaggagcgattggtcctcaagtgccacagccgcaccatc
accccaacccctgacgggaagcagatgctgagtcccatcatcagcctcaattcggccatg
acgcgcgaagtggccacagatatcaaggctttctacgtgattttcagctgggaggacgga
gctcagatctatgagctggttgcgcagacggtgtcggaaaggaagaactggtgcagtatg
atcagcgaaacagccggctgtctgaaggtccccattaaaccacggctttcagtgccaaac
agtcggtcttcaccacacagccccagcttcggctactcagaggggttgctgggcggcgcg
gagaacggcagctcccacaaggagaccctgcattcggaggcagagcgggagaaggacggg
atgctggaaggggccgagttcgaggggcgcagccctgtgagcggaccgaagctgggcaag
gcaacggaggagatcttggacgacatgctgaacttgcacaagcaccaacccgtaggccag
ggggccctgtcatctgccgcacaggacagaatatcagccctgaggaggctacttcaagta
tcggaggaaggagaggttgccttcccagcagcagaacctgtggaccgtccaccagagaac
gggaacccccgcgagggagaagaggaagaggagtgggagacgggtcatgggacggaggca
gacagcagccgacggcatccaggaggtctccccaatggccccttggagccagagtggggc
tcagagcacctggatagggaaggatccagttccataattctgacccaccaacaatctgat
ggggtgaagcatcacctgcggcttttagaagatgcgatccagggtctgaaggaaattgaa
gcggattattggcacctgcagcagctgataggaaaactcacgccatctcagccgcccagt
ttcacatga
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integrated database retrieval system
