Zootoca vivipara (common lizard): 118088440
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Entry
118088440 CDS
T07275
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
zvi
Zootoca vivipara (common lizard)
Pathway
zvi04514
Cell adhesion molecules
zvi04520
Adherens junction
zvi04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
zvi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118088440 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
118088440 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
118088440 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
zvi01009
]
118088440 (PTPRF)
Enzymes [BR:
zvi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
118088440 (PTPRF)
Protein phosphatases and associated proteins [BR:
zvi01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
118088440 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
Interfer-bind
Tc-R-P
PTP-SAK
V-set
DSPc
Y_phosphatase3
PTPlike_phytase
C2-set_2
PTP-NADK
Ig_5
Fn3_PTPRU
Insulin_TMD
Egh16-like
ICAM_N
TMEM154
DUF3377
Motif
Other DBs
NCBI-GeneID:
118088440
NCBI-ProteinID:
XP_034977986
LinkDB
All DBs
Position
LG7:48590724..49058104
Genome browser
AA seq
1899 aa
AA seq
DB search
MVPNFSIPGFFVPALVLCCLMSSTEADSKPNFMKTPEDQIGISGGVASFVCQAIGEPKPR
ITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVLRDEAIYECMATNSVGEINTSAKLT
VLEENQIPSGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNGR
IKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVSPRFSIPPSNHEV
MPGGSVNLTCVAVGSPMPYVKWIVGDVELTKEDDMPMGRNVLELTNITQSANYTCEAMSS
LGVIHATAQITVKALPKPPMEPLVTETTATSVTLTWDSGNADPISYYVIQYKSKSLEGTF
REVDGVATTRYSIGGLSPFSEYEFRIIAVNNIGRSPPSELVDARTGEQAPSSPPLKVKAR
MLSSSTMLVQWEQPEEPNGMIRGYRVYYTIDPHLPLSKWQKHNTDDNHLTTVGSLITGAT
YSIRVLAFTSVGDGPPSDVIQIKAQQGVPSQPADFQAEAESDTRIMLTWQPAPQERVTKY
ELVYWEETDGIQHKVDFDQTSSYALEGLKPDTLYKFQLAARSELGLGVYTPVLEARTAQS
TPSAPPQEVVCVSTSSTSIRVSWVPPPAQSRNGVITQYSIAYQAVEGEDNSKRVVEGIGH
EHSSWEINSLEKWTEYKVWVRAHTDVGPGPESIPVWVRTDEDVPSAPPRKVEVESVNSTT
IRVTWKSPISNKQHGQIRGYQVICVKLENNEPVGLPIMKDVMVAESQLRFKDAIDHETLI
GGLLPETSYSISIAAYTTKGDGARSRDKVVTTSGAVPGKPTMMISTTAMNTALINWHPPK
EMVGELLGYQLQYKHAEEEKMRIMNFEKNMDHFTVTDLYKGATYIFKLAAKNRVGLGEEF
EKEITTAEEAPSGFPQNLHVVGLTTSTTKVTWEPPILAERNGKMTNYTVVYRDINSQQNL
TNVTRETSITLTNLKPDTTYDIKVRAHTNKGAGPLSPSIQSRTMPMEQVFAKNFRVSAVM
KTSVLLSWEVPDSYKSAVPFKILYNGQTVEVDGHSMRKLINNLQPDTNYSFALTNRGSSA
GALQHRVFIRTAPDVIQSKPISTYKYIHNGQFTLTLPKVQTSVPVRWYYIVVVPIDHTSN
LVGSRLKSPDDMGLDQILEAMNQGDPSRRQRRQAERLKPYIAAQMDDLPETFVLGDQKSY
QGFYNKPLSEDLSYRCFVLASLEDGDTKKYAASPYSDEIVMEVSAKQQDEPEMLWVMGPV
LAVILIIIIVIAILLFKRKRANSPSAKDEHSIGLKDSLLAHSSDPVEMRRLNYQTPGMRD
HPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWENSNLEVNKPKNRYANVIAYD
HSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFWRMVWEQRTATIVM
MTRLEEKSRVKCDQYWPGRGTETYGLIQVTLLDTVELATYTVRTFALYKNGSSEKRELRQ
FQFMAWPDHGVPEYPTPILAFLRRVKACNPPDAGPVVVHCSAGVGRTGCFIVIDAMLERM
KHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEAATCGNTEVPARNLFAHIQKLS
QVPPGESVTAMELEFKLLANSKAHTSRFISANLPCNKFKNRLVNIMPYELTRVCLQPIRG
VEGSDYINASFVDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREK
CHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGV
PKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDMF
QTVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttcagcatccctgggttttttgtgccagcactagttctgtgctgcttg
atgtcatcaacggaggcggatagcaagccaaacttcatgaaaactcctgaggatcagatt
gggatatctggaggtgtggcctcctttgtatgccaagcaataggagagccaaagccacgt
atcacatggatgaagaaaggaaagaaagttagctcccaacgatttgaggttattgaattt
gatgatgggtctggatcagttctacgtattcaaccgctgcgtgtccttcgggatgaagca
atatatgagtgcatggctaccaacagtgttggagagataaataccagtgccaaactgaca
gtgttagaagagaaccagatcccatctggctttccaaccatagacatgggtccacagctc
aaggtagtagagaaggcccgcactgctacaatgctctgtgctgccagcggtaaccctgac
cctgaaatatcctggttcaaagactttcttcctgtggacacagccactagcaatggcaga
atcaaacagctccgttcaggagctctacagattgagaacagtgaagagtcagaccaaggc
aaatatgaatgtgtcgccacgaacagtgctgggacccgttactctgctccagccaacctt
tatgtgcgagtgcggcgagtgtcacctcgattttcaatccctccaagtaaccatgaggtg
atgcctggagggagcgtgaatctcacatgtgtagcagtggggtccccaatgccctatgtg
aagtggattgtcggagatgtggagctgacgaaagaagatgacatgccaatgggcaggaat
gttttagagttgaccaacatcacgcagtcggccaactacacctgcgaagccatgtcctca
ctgggggtaatccatgcaacagcacagatcactgtcaaagctcttccaaaacctccaatg
gagccattagtaacggagacaactgctaccagtgtgactctcacctgggactcaggaaat
gctgacccaatctcctactatgtcatccagtataagtccaagtcattagagggcactttc
cgagaagtagatggtgtggcaactacccgctatagcattggtggcctaagccccttctca
gaatatgagttccgcattattgctgtaaacaacattggcaggagtccccctagtgagttg
gtggatgcacggacaggagagcaagctccatcaagcccacccctcaaagtgaaggcacgg
atgctgagttccagcaccatgctggtccaatgggaacaacctgaagagcccaatgggatg
atccgtggctatcgagtgtactacaccattgacccccacctaccactcagcaagtggcag
aaacacaacactgatgataatcatctcaccactgtaggaagtttgataactggggctacc
tatagtattcgtgtcttggctttcacctcagtaggagatgggcccccttctgatgtcatc
cagataaaggcccaacagggtgttccatctcagccagctgatttccaagctgaggcagag
tctgacacacggatcatgctgacctggcagccagcacctcaagaacgtgtcaccaaatat
gagttggtgtattgggaagagacagatgggatccagcataaggtggactttgaccagacc
tcatcatatgcacttgaagggctcaagccggacacactctacaagttccagctggcagcc
cgctctgagctgggcctaggggtctataccccagttttggaagctcgaacagcacagtcc
accccttctgccccaccccaagaggtcgtgtgtgtaagcaccagctccacctctatccgg
gtaagttgggtaccaccaccggctcagagccgcaatggagtcatcacacagtattctatc
gcataccaagcggtggaaggagaggacaacagcaagcgtgtggttgagggcattggacac
gagcattcaagctgggagatcaacagcctggagaaatggacagagtacaaagtgtgggtg
agggctcacacagacgtgggtcctgggccagagagcatcccggtctgggttcgcactgat
gaagacgtgcccagtgctccacctcggaaagtggaggtagaatcagtgaactccacaacc
attcgtgttacctggaagtcacctatctctaacaagcagcatggccagatccgaggctac
caagtcatctgtgtgaagctggagaataatgagccagttgggttgcctatcatgaaagac
gtcatggtagcagagtcccagttaaggtttaaggacgctattgaccacgaaaccctcata
ggaggccttttacccgaaacatcctattctatcagcatcgcagcctacaccaccaaaggg
gatggggcccgcagcagggacaaggtggttactacaagtggagcagtcccaggcaagcct
accatgatgatcagcaccacagccatgaatacagctctgatcaattggcacccacctaaa
gagatggttggggagctgctgggctaccagctgcagtacaaacatgctgaggaggagaag
atgaggattatgaactttgagaagaacatggatcacttcaccgtgactgacctttacaag
ggagccacctacatcttcaagctggctgcgaagaatagggttggtcttggggaggagttt
gaaaaagaaatcactaccgcagaggaggcaccaagcggtttcccccagaacctgcacgtg
gtgggcctgaccacgtccaccactaaagtgacttgggagccaccaattctggcggagagg
aatgggaaaatgaccaactacacagttgtgtacagagacattaacagccagcagaacctg
accaatgttacaagggaaacgagcatcactctgaccaacctcaaacctgacacaacctat
gacatcaaagttagagcccacactaacaagggagctggccctctcagccccagcattcag
tctaggacgatgccaatggaacaagtgttcgcaaagaactttcgtgtcagtgctgtgatg
aaaacatcagtgctacttagctgggaggttccagactcttacaaatctgcagttcctttc
aagattctgtacaatggccagactgtggaggtggatggccactccatgaggaagctgatt
aataacctgcagccagacacaaattattcctttgcactcacaaaccggggaagtagcgca
ggagccttgcagcaccgagtcttcatccggacagcacctgatgtcatccagagcaagccc
atttccacatacaaatatatccataatgggcagttcactctgactctccccaaagtgcag
acctctgtgccagtcaggtggtactacatcgtggttgtgccgatagaccacacaagcaac
ctagttggctccagattgaagagcccggatgatatgggactagaccagatacttgaggcc
atgaaccaaggggacccaagcaggcgccagcgacgccaggcagagcggctcaagccttac
attgctgcccaaatggatgatctaccagagacctttgtcttgggggaccagaagagctat
caaggcttctacaataagcccctttcagaagacttgagctaccgttgttttgtgctggct
tcactggaggatggggatacgaagaagtatgcagccagtccctactcagatgagattgtg
atggaggtttcagcaaaacagcaggatgaaccagagatgctgtgggtgatggggcctgtc
ctggctgtcatcttaatcatcatcattgtcattgctatcctgctcttcaaaaggaaaagg
gccaattcaccctctgccaaggatgaacattccattggcctgaaggactccttgctggcc
cattcctctgaccctgttgaaatgaggcgactcaactaccaaacaccaggcatgcgtgat
catcctcccattccagtgacggacctcgcagacaacatcgaccgactgaaggccaatgat
gggctgaagttttcccaggaatatgagtcgattgatcctgggcagcagttcacctgggag
aactccaacctagaagtgaacaaaccaaagaaccgctatgcaaatgtgattgcctatgac
cattcacgtgtcattctgacctccattgatggtgttcctggaagtgactacatcaatgct
aattacattgatggctaccggaagcagaatgcctacattgctacacaagggcctttgcca
gagacactcagtgacttctggaggatggtatgggaacagcgcacagcaactatcgtcatg
atgactcggttggaggagaagtctcgggtgaagtgcgaccagtactggccaggccgtggt
acagagacctatggattgatccaggtgacattgctggacacagttgaacttgccacgtac
acagttcggacatttgccctctacaagaatgggtccagtgaaaagcgggagctgcggcag
ttccagtttatggcttggcctgaccatggggtgccagagtaccctaccccgatcttagcc
ttcctgagaagagtgaaagcctgcaacccccctgatgctgggccagtggttgtacattgc
agtgccggtgtgggcaggacaggctgcttcattgtaattgatgccatgcttgagaggatg
aagcatgagaagacagtggacatctatgggcatgtgacatgcatgcgctcacaaagaaac
tatatggtgcagactgaggatcagtatatcttcatccacgaggccttgcttgaagcagcc
acctgtggaaacactgaggtgcctgcacgcaacctctttgctcacatccagaagctgagt
caggtacctccgggtgagagtgtcacagcaatggaactggagtttaagctccttgccaac
tctaaagcacatacctcacgattcatcagtgccaacctcccctgcaacaaattcaaaaac
cgcctggtgaatattatgccctatgagctgacacgggtttgcctgcagccaatccgaggc
gtcgagggctccgattacatcaatgccagctttgtagatggctataggcagcaaaaggcc
tacatcgccacacagggaccccttgctgaaactacagaggatttctggcggatgctgtgg
gagcacaactctactattgtggtgatgctgaccaaattgcgagagatggggcgggagaaa
tgccaccagtactggccagcagagcgttctgctcggtaccagtactttgtggtggatccc
atggctgaatacaacatgccccagtacattctgcgtgagttcaaggtcactgatgccaga
gatggacagtcaagaaccatccggcagttccagttcactgactggcctgagcagggcgta
ccaaaaactggagaggggttcattgacttcattgggcaagttcataaaaccaaggagcag
tttggccaggatgggcccatcactgtacactgcagtgcgggggtcggacgcacaggggtg
ttcatcacattaagcattgtactggagcgtatgcgctatgagggcgtagttgacatgttc
cagactgtgaagaccttgaggacacaacgaccagccatggtgcaaacagaggaccagtat
cagctgtgctacagggctgcactggagtaccttggcagcttcgatcactatgcaacgtaa
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integrated database retrieval system
